Gene detail information of Glyur000330s00019519 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14920.1 | 3.00E-05 | Gibberellin-regulated family protein |
| NR | XP_004489331.1 | 2.86E-19 | PREDICTED: gibberellin-regulated protein 14-like [Cicer arietinum] |
| trEMBL | tr|I3SF09|I3SF09_LOTJA | 3.00E-19 | Uncharacterized protein {ECO:0000313|EMBL:AFK38851.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00330 | 79099 | 80835 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000330s00019519.1 | PF02704.9 | GASA | 152 | 178 | 4.20E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 97.890 |
| SRR1783600 | control | 96.295 |
| SRR1783602 | moderate drought stress | 85.591 |
| SRR1811619 | moderate drought stress | 85.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.992 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.736 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.384 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.295 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.518 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 52.050 |
| SRR2868004 | Drought Stress (root) | 18.139 |
| SRR2967015 | Control (root) | 31.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.823 |
| SRR9715740 | Leaf | 0.176 |
| SRR9715741 | Leaf | 0.800 |
| SRR9715739 | Root | 46.350 |
| SRR9715742 | Root | 10.129 |
| SRR9715743 | Root | 16.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.035 |
| SRR8749028 | MeJA induced 9h | 0.101 |
| SRR8749029 | MeJA induced 9h | 0.037 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.336 |
| SRR8400027 | Control - Root | 51.072 |