Gene detail information of Glyur000330s00019517 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK34281.1 | 5.51E-23 | unknown [Medicago truncatula] |
| trEMBL | tr|I3S1Y9|I3S1Y9_MEDTR | 2.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:AFK34281.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00330 | 67293 | 68361 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.549 |
| SRR1783600 | control | 22.007 |
| SRR1783602 | moderate drought stress | 19.765 |
| SRR1811619 | moderate drought stress | 14.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.120 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.106 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.237 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.464 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 62.103 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 71.461 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.970 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.735 |
| SRR2868004 | Drought Stress (root) | 1.609 |
| SRR2967015 | Control (root) | 2.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.007 |
| SRR9715740 | Leaf | 2.721 |
| SRR9715741 | Leaf | 1.787 |
| SRR9715739 | Root | 0.376 |
| SRR9715742 | Root | 1.658 |
| SRR9715743 | Root | 2.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.373 |
| SRR8749028 | MeJA induced 9h | 4.086 |
| SRR8749029 | MeJA induced 9h | 1.437 |
| SRR8749030 | Uninduced | 2.552 |
| SRR8749031 | Uninduced | 0.711 |
| SRR8749032 | Uninduced | 0.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.321 |
| SRR8400027 | Control - Root | 2.727 |