Gene detail

Gene detail information of Glyur000330s00019516

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G14930.2	8.00E-84	senescence-associated gene 101
NR	XP_004489332.1	0	PREDICTED: uncharacterized protein LOC101494733 [Cicer arietinum]
Swissprot	tr\|Q4F883\|SG101_ARATH	1.00E-92	Senescence-associated carboxylesterase 101 (Precursor)
trEMBL	tr\|K7MVX6\|K7MVX6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G01605.2}

Sequence

Transcript Sequence

>Glyur000330s00019516.1
ATCAATCTTCATTACCCTTCAACCATCTTTCATCAGTTCTCAACAGCACACTACTGCATCACACAATTCACAAAGAGCTTGTTCTACTTCTTCAAATTAAGTTGCTTGTTCTGTCTACTCTTTAAGGCCGTTTTTATATTCAGAAAAGCACCATGACCCAATCTCTACTATTTAGCGGTGGAATTGAGCTTGCACCTTTTGTGACAAGCTCTGGTGTTCCTCGAAGATCATGGGATGCTTCTCGTCATGCAAACATCGTTTCAAATGTTGGTGTGGGGATATCCTGGAAAGTTAATAAAGAACCGGATACTGATGTGACCATTGTAGCTTTTGAGGCCACCCCACCAGATTCTTCTTCTTCTTCTTCCAATCTTCGACCTGGTTTGGTTTCATCTTTTCAACTAAGGGAGAAGGGTTTCCTTCACTTTGAGTTTCTGTGTACCAAGAAAAACCCAATTTTCTCTCTTAACAGCACTGCAATTAATAGTTCCCCTCGATTGATTGTTACTGGACATGCTCTTGGAGGACCAATTGCTTCTCTCTTCACTTTATCATTGTTGGATAGCATTGATCCAGGAAAGAAAAGACCTCTCTGCATCACCTTTGGTTCACCCCTTGTTGGTGACAAGGAATTGCAACAAGCCATATCACGTAGCTCTAATTGGAACTCTTGCTTTCTACACGTTGTGTCACACAAAGACCCTCTTCCAAGGCTCTTCATCGATGACTACATGCCTAACCCTGATTCCACTTTGGAAATTCTCAAGACATGGCACTCAATCCATGCTCAAAATCAAGGATCTCAATCTGTTGATTANGGAAATATAGTGGAAAGTCTCAATCGTAAAGCAATTTGCAAGGACTTTTCCACTACTCAGGCTGAACACGACTCATCCAGATTCACTAACAAGTGGTATCAGTTTACCGGAATATCATTTGATCCATCCAAGAAATTGAATACAATGAAGGTATATCTGGCCCAACTTGAATGGTACAAAAAGGAAACTAAAAATGAGCAAATAGGGTACTATGACAGCTACAAAAACATGAGCTTACCACGGGACCATGATGTTGTGGGGTACCAAAAAAACCTCACAAAGTACTGGGAAGAGATGGTTGAAGAAGCAGAGATGAGGCCTCAAAAAGAAGGCGTGAATTTCCGTAAACGCTGGCTCTATGGTGGAACTACTTACAGGAGAATGGTTGAACCTCTAGCTATTGCTGAATACTATCGCCCTGTGGAGGGTAGAGAGTCAGCTAGAGACTNTGTGAATAGGAAAAGGTCCAAACACTTCAAACAGTTGGAGGAGTGGTTTAATGAAGCGAGCACAAAAGANAAAAGTAATCTGAACAGTACAAGTAGTGTGGAATCAATCTTAACCATAGATTCTTGCTTTTGGGCACATGTTGAAGAGGCTATCCTTTCATGCAAAGAGTTGAGGGATGTACAGTCTAGTGTCATAGAAAAGGAAGAGNCAACTAGGAAACTGCTTGAATTTGAGAAGTATGTTTATGGGTTGCTCGAAAAATATCATGTGTCACCAGAGATCTTCCTGACAAAAAGCAGCTATATGAAATGGTGGAATGAGTATAAGGCAATTAAGGGAACTTCATATAGTTCAGCACTCACACGTTTTATGAGCAATGCTGATAACTATAATGAGCAGTATGTTAGAGGAACCTATAATTTCGAGTTTAGCAGTGGAATCGAGCTTGCAGCTTTTGTGACAAGCTGTCAAACCCTTTGTAAATCATGGGGTGTTATCTCATCTCGTTATGAAGGAATCACTTCAAACGAGGGAGTGAAACTATCTTGGAAAGTTTACAAAGAACCTGGTTCAGATTTGACTGTTATAGCCTTTGAGGCCACCCCAGATTCTTCTTCCAATCTTCAACCTGATTTGGTTTCATCTTCTGATCTCAAGCAGANGGCTTTCCTTCAATTTATGTGTACCAAGAATAACCCAGTTTTGTCACTTAACAACACTGCAGTTTCACTCTTTTGTGAAAATCATCAGAACCTTGACCAGTTGAAATCTGAGATTAATGGTTCCACACCATTGATTGTCACTGGACATGGTCTTGGAGGATCAGTTGCTTCTCTCTTCACTATATCACTATTAGATAGCATTGGTTCAGGAAAGAACCGACCTCTCTGCATCACCTTTGGTTCACCCCTTNTTGGTGACAAGAAATTGCAACAAGCCATATCACGTAGCTCTAATTGGAACTCTTGCTTCCTACACGTTGTTTCACACAAAGACCCTCTTCCAAGGCTCTTCATCAATTCCTACATGCCTTTTGGAACATTCCTCTTGTGTTCTGATGAAAGTTCTACTTGTTTTGAGAACCCTGATTCTACTTTGGAAATTCTCAAGACATGGGACTCAATCCATGCTCAAAATCAAGGATCTCAATCTGTTGATTATGGAAATGTAGTGGAAAGTCTCAGTCTTAAAGCAATTTGCAACGACTTTTCCACTCAGGCTGAACACAAGCCTAATCCAGACTCACTAGCAAGTGGTATCAGCTCACTAAAATTGACTCATCCAGATTCACTAACAAGTGGTATCAGTTTACAGTTGAGGGCACTAGGATTGACAACACAAGTGCAGGGGATATCATTTGATCCATCCAAGAAATTGAATCAAATGAAGGGATATCTGGCCCAACTTGAATGGTACAAGAAGGAAACTAAAAATCAGCAAATAGGGTACTATGACAGCTACAAAAACATGAGCTCACCATGGGACTATGATGTTGTAGAGTTCCATAAGAAGCTCACCATTTACTGGGAAAAGATGGTTGAAGAAGCAGAGATGAAGCCTCAAACAGAAGGCGCAAATTTCCGTAAACGCTATCTCTACGGTGGGACTACTTACAGGAGAATGGTTGAACCTCTAGCTATTGCTCAATACTATAAAGATGGGGGTAGAGACTATGTGAATAAGAAAAGGTCCAAACACTTCAAACAGTTGGAGGAGTGGTTGAATGAAGCGAGCACAAAAGACAAAAGTAATCTGAACAGTACAAGTAGGAAGAATGTGGAAGCTATTTTGACCATAGATTCTTGCTTTTGGGCCCGTGTTGAAGAGGGTATCCTTTCATGCAAAGAGTTGAAGGTTGACAAAGAGAATCAAGAGGCATTGAAGAAGTTGCTTGATTTTGAAGAGTATGTTTATGGGTTGCTNAAGGCCTATGCAGTGTCCCCAGAGATTTTCTTGCCACAAAGCAGCTATATGAGTTGGTGGAAGGAGTATAAAGCAATGAAGGGAACTTCATATGATTCAAAACTCGCAAACTTCATGAATGATCCTAGAAAGCGTCNGCAGTATACTTCGGGAACTTATGATTTCCCCTGA

Protein Sequence

>Glyur000330s00019516.1
MTQSLLFSGGIELAPFVTSSGVPRRSWDASRHANIVSNVGVGISWKVNKEPDTDVTIVAFEATPPDSSSSSSNLRPGLVSSFQLREKGFLHFEFLCTKKNPIFSLNSTAINSSPRLIVTGHALGGPIASLFTLSLLDSIDPGKKRPLCITFGSPLVGDKELQQAISRSSNWNSCFLHVVSHKDPLPRLFIDDYMPNPDSTLEILKTWHSIHAQNQGSQSVDXGNIVESLNRKAICKDFSTTQAEHDSSRFTNKWYQFTGISFDPSKKLNTMKVYLAQLEWYKKETKNEQIGYYDSYKNMSLPRDHDVVGYQKNLTKYWEEMVEEAEMRPQKEGVNFRKRWLYGGTTYRRMVEPLAIAEYYRPVEGRESARDXVNRKRSKHFKQLEEWFNEASTKXKSNLNSTSSVESILTIDSCFWAHVEEAILSCKELRDVQSSVIEKEEXTRKLLEFEKYVYGLLEKYHVSPEIFLTKSSYMKWWNEYKAIKGTSYSSALTRFMSNADNYNEQYVRGTYNFEFSSGIELAAFVTSCQTLCKSWGVISSRYEGITSNEGVKLSWKVYKEPGSDLTVIAFEATPDSSSNLQPDLVSSSDLKQXAFLQFMCTKNNPVLSLNNTAVSLFCENHQNLDQLKSEINGSTPLIVTGHGLGGSVASLFTISLLDSIGSGKNRPLCITFGSPLXGDKKLQQAISRSSNWNSCFLHVVSHKDPLPRLFINSYMPFGTFLLCSDESSTCFENPDSTLEILKTWDSIHAQNQGSQSVDYGNVVESLSLKAICNDFSTQAEHKPNPDSLASGISSLKLTHPDSLTSGISLQLRALGLTTQVQGISFDPSKKLNQMKGYLAQLEWYKKETKNQQIGYYDSYKNMSSPWDYDVVEFHKKLTIYWEKMVEEAEMKPQTEGANFRKRYLYGGTTYRRMVEPLAIAQYYKDGGRDYVNKKRSKHFKQLEEWLNEASTKDKSNLNSTSRKNVEAILTIDSCFWARVEEGILSCKELKVDKENQEALKKLLDFEEYVYGLLKAYAVSPEIFLPQSSYMSWWKEYKAMKGTSYDSKLANFMNDPRKRXQYTSGTYDFP

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00330	65763	76003	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006629 lipid metabolic process

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000330s00019516.1	PF01764.20	Lipase_3	112	192	4.10E-15
Glyur000330s00019516.1	PF01764.20	Lipase_3	620	711	1.30E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	31.125
SRR1783600	control	31.491
SRR1783602	moderate drought stress	26.895
SRR1811619	moderate drought stress	27.821

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	53.740
DRR006520	Root Summer glycyrrhizin high producing strain	50.917
DRR006521	Root Winter glycyrrhizin high producing strain	21.645
DRR006522	Root Winter glycyrrhizin high producing strain	21.363
DRR006523	Root Summer glycyrrhizin low producing strain	92.085
DRR006524	Root Summer glycyrrhizin low producing strain	92.025
DRR006525	Leaf Summer glycyrrhizin high producing strain	56.092
DRR006526	Leaf Summer glycyrrhizin high producing strain	58.525

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	54.962
SRR2868004	Drought Stress (root)	70.209
SRR2967015	Control (root)	60.490

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	90.671
SRR9715740	Leaf	95.996
SRR9715741	Leaf	106.749
SRR9715739	Root	9.911
SRR9715742	Root	50.049
SRR9715743	Root	44.317

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.430
SRR8749028	MeJA induced 9h	40.219
SRR8749029	MeJA induced 9h	21.970
SRR8749030	Uninduced	46.978
SRR8749031	Uninduced	13.976
SRR8749032	Uninduced	10.843

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	49.463
SRR8400027	Control - Root	59.583