Gene detail information of Glyur000330s00019506.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31940.1 | 2.00E-65 | cytochrome P450, family 82, subfamily C, polypeptide 4 |
| NR | XP_003618345.1 | 1.52E-134 | Cytochrome P450 [Medicago truncatula] |
| COG | YP_004303682.1 | 6.00E-27 | cytochrome P450 [Polymorphum gilvum SL003B-26A1] |
| Swissprot | tr|O49858|C82A3_SOYBN | 5.00E-110 | Cytochrome P450 82A3 |
| trEMBL | tr|G7KJD5|G7KJD5_MEDTR | 6.00E-135 | Cytochrome P450 family protein {ECO:0000313|EMBL:AES74563.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00330 | 11413 | 12048 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP82C4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000330s00019506.1 | PF00067.17 | p450 | 4 | 190 | 3.90E-61 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.057 |
| SRR1783600 | control | 0.058 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.109 |
| SRR2868004 | Drought Stress (root) | 1.668 |
| SRR2967015 | Control (root) | 0.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.525 |
| SRR8749029 | MeJA induced 9h | 0.096 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.968 |
| SRR8400027 | Control - Root | 0.867 |