Gene detail information of Glyur000329s00019850 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06240.1 | 3.00E-121 | Protein of unknown function DUF455 |
| NR | XP_004487175.1 | 0 | PREDICTED: uncharacterized protein HI_0077-like [Cicer arietinum] |
| COG | YP_005031764.1 | 8.00E-50 | conserved protein of unknown function [Azospirillum brasilense Sp245] |
| trEMBL | tr|I1LUL2|I1LUL2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G33680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00329 | 168257 | 170991 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000329s00019850.1 | PF04305.9 | DUF455 | 178 | 383 | 4.20E-75 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.657 |
| SRR1783600 | control | 7.489 |
| SRR1783602 | moderate drought stress | 8.652 |
| SRR1811619 | moderate drought stress | 8.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.058 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.172 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.437 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.240 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.382 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.791 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.157 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.173 |
| SRR2868004 | Drought Stress (root) | 3.589 |
| SRR2967015 | Control (root) | 5.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.573 |
| SRR9715740 | Leaf | 1.922 |
| SRR9715741 | Leaf | 1.281 |
| SRR9715739 | Root | 3.125 |
| SRR9715742 | Root | 2.824 |
| SRR9715743 | Root | 3.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.013 |
| SRR8749028 | MeJA induced 9h | 15.148 |
| SRR8749029 | MeJA induced 9h | 10.657 |
| SRR8749030 | Uninduced | 5.653 |
| SRR8749031 | Uninduced | 1.139 |
| SRR8749032 | Uninduced | 3.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.771 |
| SRR8400027 | Control - Root | 8.534 |