Gene detail

Gene detail information of Glyur000329s00019839

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G58120.1	1.00E-60	Basic-leucine zipper (bZIP) transcription factor family protein
NR	KEH39224.1	7.76E-156	bZIP family transcription factor [Medicago truncatula]
Swissprot	tr\|Q9M2K4\|BZP61_ARATH	9.00E-115	Basic leucine zipper 61
trEMBL	tr\|A0A072VB17\|A0A072VB17_MEDTR	3.00E-156	BZIP family transcription factor {ECO:0000313\|EMBL:KEH39224.1}

Sequence

Transcript Sequence

>Glyur000329s00019839.1
ATGGCACAATTGCCTCCTAAGATTCCAAACATGTCACCAAGTTGGCCAGACTTTTCCTCTCACCAGAAAATGCCACCCTCCTTTGGAAGCATGTCAAACATTAATGCAACCACCGCCACCAACAACAATATTAACACAAACCATTACAATCATCAACATAATCAGAACCCTTCTTGGGTTGATGAGTTCCTTGACTTCTCCTCCGCCAGGCGCGGCGCTCACCGGCGGTCGGTGAGCGACTCCGTCACCTTCCTAGAGGCGCCAATGCTGGATGAGGATTGTCATGGTGGCAAAGTATTACATAGTAATAATAACGACAAGTACGAGTTCGACAAGTTTGATGATGAGCAATTCATGTCCATGTTCAACGATGAAATCTCTGGGGTCCACAATATGCCCCCCACGTTGTCCTCCTCCAACCCTTCTAGTCCTTCTGATCAGAACAACTTCATCAATGATGAGAATGAGAAAGAGACCAAAGATAAACAAGAGAACTACAAGGAGAGGGAAGTGGAGGAAGAGGAGCAGCAGAATAAGAAGAAGAAGAAGAAGAAAAAAAAAAAGACAGAGGAAGATGATATTGATGAGAACAACCACCACCTTCAGCAGCAACAATTGAAAAATGAACCCGATGAGGTTGAAAGCCAATGCAAACTGGAAATTTCACAGCCTACAAATAATGCTTCTTCTAATGACAGAATTACTGACCCCAAGAGAGTCAAAAGAATATTGGCAAATAGGCAATCTGCGCAAAGGTCGCGTGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTGCTGTCACCACGGGTTGCATTTTTAGATCATCAACGCTTGCTTCTAAATGTTGACAACAGTGCTCTCAAGCAAAGAATCGCCGCCCTTGCCCAAGACAAGATCTTTAAGGATGCTCATCAAGAGGCACTGAAGAGGGAAATAGAGAGACTAAGACAAGTGTACCACCAACAGAACCTCAAGAAGATGGAAAATGCAGCAGGGTCACCCTTACCATCCCCATCACCNAAGCCAATATGTGAATCTCAGACAGAAAAGGAACAACTTCTCAATGTATGATCAACCGAACCCCTCCATCCAAGAAGACTCACACTATATAGCATGATCAAATTAGTAGCTAGCTAGTTTACATGATGATACTGTGATTCTTTATATTTTTTTATAAAAGAAATTGCAGAATTTTGGATAAGAAAAAAGGAAAAGGGGATCAAAGAATTGAAGAGATAAAAAAGGCAAGATTTTTTTTGTAATGTGATTGCATAATTATGTAATGTATTGAATGGGGTCACGTACTGTTGGGTGGTGAGATGGTGAGAATTTTTATTAGTTAATTGGTATGAAGGGGGAAATATCTTCACTGAGAAGAGTCACGTTCTGTGGGTNGTGGTGGTAGTATAGGCCTTTCTGCTATGAAACAGCGCAGGCACGTGATGTGTTATATACTTTAAAAAGAAGGGGACCACTCAAAGTTTGCATGATTGGGAATGCAGGGGAGAAACACATGTGCTGCAGTGGCATCAAAAGAGAGGGTGGAAGAAACAGTTGTGTCTGCTTTAACTTGATGATAGGAGTGGATGGAGCGAGGTATAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00329	106171	109538	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000329s00019839.1	PF07716.10	bZIP_2	235	283	3.50E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.045
SRR1783600	control	0.044
SRR1783602	moderate drought stress	0.093
SRR1811619	moderate drought stress	0.093

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.066
DRR006520	Root Summer glycyrrhizin high producing strain	0.064
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.066
DRR006523	Root Summer glycyrrhizin low producing strain	0.067
DRR006524	Root Summer glycyrrhizin low producing strain	0.067
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.929
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.892

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.703
SRR2868004	Drought Stress (root)	12.439
SRR2967015	Control (root)	15.257

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.096
SRR9715740	Leaf	0.039
SRR9715741	Leaf	0.391
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.151

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.020
SRR8749028	MeJA induced 9h	0.041
SRR8749029	MeJA induced 9h	0.466
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.091
SRR8749032	Uninduced	0.095

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.757
SRR8400027	Control - Root	2.075