Gene detail

Gene detail information of Glyur000329s00019822

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G28500.1	5.00E-84	NAC domain containing protein 73
NR	XP_004487194.1	2.86E-168	PREDICTED: NAC domain-containing protein 8-like [Cicer arietinum]
Swissprot	tr\|Q6NQK2\|NAC8_ARATH	7.00E-65	NAC domain-containing protein 8
trEMBL	tr\|I1LUJ2\|I1LUJ2_SOYBN	1.00E-162	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G33460.1}

Sequence

Transcript Sequence

>Glyur000329s00019822.1
CCACTCTTATTAATTATATNACTACTTTATAAATTCATCTCTTGACTCAAGCTATCTCTCAGTCTCCCTCTGTCTATCTTTTTTGGTTTCTGTTCCATTTTTTTATAGCAGCATATATAAGAGGAGACTAGAGCAAAGAAGATATATCCAGAATGGAATGAGGGAGAAAATTAGGATAACAAGGAAATTATGACTCAGTGCAGTTACCCTGAAAACAGTTCAATCAGAACTTGTCCTACATGTGGTCATCATATCAAATGCCAAGAGCAGGCTGTTGGGATTCATGACTTACCTGGACTGCCTGCTGGAGTGAAGTTTGATCCTACTGATCAGGAGATTCTTGAACATTTGGAAGCAAAGGTGCGGTCTGATATTCACAAGCTTCACCCCTTAATTGATGAATTCATCCCTACTCTTGAAGGGCAGAATGGAATCTGCTGTACCCATCCAGAGAAGTTGCCAGGAGTTAGCAAGGATGGCCTGATCCGGCATTTCTTTCACAGGCCCTCTAAAGCATACACGACAGGAACAAGGAAGAGGAGAAAGGTGCATGCAGATGAGGATGGTAGTGAGACACGGTGGCACAAAACAGGTAAGACTAGGCCAGTCTATGTCAGTGGCAAGTTGAAAGGGTACAAGAAAATCCTTGTNCTCTACACTAACTACAGAAAGCAAAAAAAGCCAGAGAAAACAAACTGGGTCATGCACCAGTACCACCTTGGCAATAATGAAGAGGAGAAGGAAGGGGAGTTAGTAGTATCCAAGGTTTTCTATCAAACACAACCTAGACAATGTGGCAATTCACTGATGAAAGACTCAACAATATTTCCAGCAAAACTAAGTGGTCAAGGAGTGCNTGAGGCGGTACTTAATCATAAAAATAGTGGGTTTGTTGAATACTACAATGCTTCTTCTTACATATCCTTTGATCAAGGGNACCAAGTACATAGATCTAGCAATGCTCAAGTAATTTCCCATTTTCCTGTCCATGATGGTACTTCTCCTTTCATGCCTTGAAAGAAGTAGTAGTGGAGGGGAAGAGGGAGGTAACAATATTGAAAGGAGATGATGGAGCATTACCGTTGTATTCTGCAATGAAGAAATAAGTTAATAACCAACAGTAATTAGGAGGGGAAAAAGATGGACAGAATAAGGACAAAAGAAACTGCTTCACCTGAAAACTAGTGGAGAAAAGTAAAGAAAATAAAAATATTTGGCTGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00329	44994	46898	+

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000329s00019822.1	PF02365.10	NAM	37	177	3.40E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.710
SRR1783600	control	4.634
SRR1783602	moderate drought stress	3.239
SRR1811619	moderate drought stress	3.237

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.198
DRR006520	Root Summer glycyrrhizin high producing strain	4.915
DRR006521	Root Winter glycyrrhizin high producing strain	0.182
DRR006522	Root Winter glycyrrhizin high producing strain	0.178
DRR006523	Root Summer glycyrrhizin low producing strain	4.809
DRR006524	Root Summer glycyrrhizin low producing strain	4.543
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.372
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.207

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.847
SRR2868004	Drought Stress (root)	11.494
SRR2967015	Control (root)	11.794

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.510
SRR9715740	Leaf	5.455
SRR9715741	Leaf	1.375
SRR9715739	Root	0.521
SRR9715742	Root	4.649
SRR9715743	Root	2.643

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.087
SRR8749028	MeJA induced 9h	1.019
SRR8749029	MeJA induced 9h	0.450
SRR8749030	Uninduced	0.057
SRR8749031	Uninduced	0.352
SRR8749032	Uninduced	0.024

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.741
SRR8400027	Control - Root	12.657