Gene detail information of Glyur000329s00019818 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20562.1 | 1.00E-08 | |
| NR | XP_003543322.1 | 4.43E-32 | PREDICTED: uncharacterized protein LOC100820571 [Glycine max] |
| trEMBL | tr|C6T663|C6T663_SOYBN | 2.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G37000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00329 | 17987 | 18795 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.280 |
| SRR1783600 | control | 4.206 |
| SRR1783602 | moderate drought stress | 3.610 |
| SRR1811619 | moderate drought stress | 3.564 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.033 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.393 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.154 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.163 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 221.047 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 222.628 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.192 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 68.991 |
| SRR2868004 | Drought Stress (root) | 122.930 |
| SRR2967015 | Control (root) | 197.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 119.135 |
| SRR9715740 | Leaf | 76.578 |
| SRR9715741 | Leaf | 159.947 |
| SRR9715739 | Root | 168.102 |
| SRR9715742 | Root | 243.027 |
| SRR9715743 | Root | 233.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1674.441 |
| SRR8749028 | MeJA induced 9h | 1571.814 |
| SRR8749029 | MeJA induced 9h | 2846.659 |
| SRR8749030 | Uninduced | 4526.783 |
| SRR8749031 | Uninduced | 2203.996 |
| SRR8749032 | Uninduced | 2194.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.751 |
| SRR8400027 | Control - Root | 95.762 |