Gene detail information of Glyur000328s00018327 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60335.1 | 7.00E-49 | Thioesterase superfamily protein |
| NR | XP_004491188.1 | 1.04E-105 | PREDICTED: LOW QUALITY PROTEIN: (R)-specific enoyl-CoA hydratase-like [Cicer arietinum] |
| COG | YP_004282888.1 | 8.00E-26 | hypothetical protein ACMV_06590 [Acidiphilium multivorum AIU301] |
| trEMBL | tr|I1M7A1|I1M7A1_SOYBN | 2.00E-97 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G04500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00328 | 69747 | 71222 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000328s00018327.1 | PF01575.14 | MaoC_dehydratas | 35 | 129 | 6.90E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.845 |
| SRR1783600 | control | 2.904 |
| SRR1783602 | moderate drought stress | 2.569 |
| SRR1811619 | moderate drought stress | 2.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.429 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.570 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.453 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.496 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.787 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.550 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.169 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.477 |
| SRR2868004 | Drought Stress (root) | 2.940 |
| SRR2967015 | Control (root) | 2.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.802 |
| SRR9715740 | Leaf | 1.726 |
| SRR9715741 | Leaf | 0.531 |
| SRR9715739 | Root | 0.883 |
| SRR9715742 | Root | 1.890 |
| SRR9715743 | Root | 1.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.398 |
| SRR8749028 | MeJA induced 9h | 2.334 |
| SRR8749029 | MeJA induced 9h | 5.594 |
| SRR8749030 | Uninduced | 1.196 |
| SRR8749031 | Uninduced | 0.470 |
| SRR8749032 | Uninduced | 1.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.352 |
| SRR8400027 | Control - Root | 5.172 |