Gene detail information of Glyur000326s00025793 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53020.1 | 1.00E-121 | Ribonuclease P protein subunit P38-related |
| NR | XP_006578898.1 | 0 | PREDICTED: coiled-coil domain-containing protein 18-like isoform X1 [Glycine max] |
| trEMBL | tr|I1JYQ7|I1JYQ7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G41340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00326 | 100203 | 103565 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.032 |
| SRR1783600 | control | 3.089 |
| SRR1783602 | moderate drought stress | 3.117 |
| SRR1811619 | moderate drought stress | 3.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.285 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.291 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.139 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.973 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.834 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.804 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.668 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.439 |
| SRR2868004 | Drought Stress (root) | 19.689 |
| SRR2967015 | Control (root) | 28.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.997 |
| SRR9715740 | Leaf | 4.157 |
| SRR9715741 | Leaf | 5.825 |
| SRR9715739 | Root | 0.150 |
| SRR9715742 | Root | 2.687 |
| SRR9715743 | Root | 1.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.091 |
| SRR8749028 | MeJA induced 9h | 50.280 |
| SRR8749029 | MeJA induced 9h | 15.139 |
| SRR8749030 | Uninduced | 20.956 |
| SRR8749031 | Uninduced | 10.030 |
| SRR8749032 | Uninduced | 3.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.767 |
| SRR8400027 | Control - Root | 20.094 |