Gene detail information of Glyur000326s00025792 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53030.1 | 1.00E-08 | |
| NR | XP_007136515.1 | 1.51E-71 | hypothetical protein PHAVU_009G051700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9M160|Y4095_ARATH | 5.00E-07 | Uncharacterized protein At4g00950 |
| trEMBL | tr|V7ASF7|V7ASF7_PHAVU | 6.00E-72 | Uncharacterized protein {ECO:0000313|EMBL:ESW08509.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00326 | 76960 | 79613 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000326s00025792.1 | PF05097.7 | DUF688 | 27 | 80 | 0.00016 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.872 |
| SRR1783600 | control | 15.588 |
| SRR1783602 | moderate drought stress | 12.432 |
| SRR1811619 | moderate drought stress | 12.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.286 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.576 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.133 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.130 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.036 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.978 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.980 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.997 |
| SRR2868004 | Drought Stress (root) | 15.244 |
| SRR2967015 | Control (root) | 22.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.554 |
| SRR9715740 | Leaf | 2.885 |
| SRR9715741 | Leaf | 0.999 |
| SRR9715739 | Root | 8.925 |
| SRR9715742 | Root | 9.651 |
| SRR9715743 | Root | 8.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.735 |
| SRR8749028 | MeJA induced 9h | 6.309 |
| SRR8749029 | MeJA induced 9h | 4.757 |
| SRR8749030 | Uninduced | 2.602 |
| SRR8749031 | Uninduced | 0.252 |
| SRR8749032 | Uninduced | 1.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.050 |
| SRR8400027 | Control - Root | 15.079 |