Gene detail information of Glyur000326s00025788 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46550.2 | 6.00E-11 | |
| NR | XP_004502670.1 | 0 | PREDICTED: uncharacterized protein LOC101488649 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7J7G7|G7J7G7_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:AES72528.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00326 | 34260 | 38878 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.192 |
| SRR1783600 | control | 17.360 |
| SRR1783602 | moderate drought stress | 16.845 |
| SRR1811619 | moderate drought stress | 17.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.550 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.858 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.022 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.997 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.300 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.508 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.296 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.655 |
| SRR2868004 | Drought Stress (root) | 29.027 |
| SRR2967015 | Control (root) | 35.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.550 |
| SRR9715740 | Leaf | 10.557 |
| SRR9715741 | Leaf | 9.632 |
| SRR9715739 | Root | 6.167 |
| SRR9715742 | Root | 16.161 |
| SRR9715743 | Root | 12.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.300 |
| SRR8749028 | MeJA induced 9h | 21.972 |
| SRR8749029 | MeJA induced 9h | 14.483 |
| SRR8749030 | Uninduced | 9.984 |
| SRR8749031 | Uninduced | 4.057 |
| SRR8749032 | Uninduced | 4.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.342 |
| SRR8400027 | Control - Root | 40.987 |