Gene detail information of Glyur000326s00025785 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24314.1 | 4.00E-41 | plastid transcriptionally active7 |
| NR | XP_004502678.1 | 1.08E-100 | PREDICTED: uncharacterized protein LOC101490727 [Cicer arietinum] |
| trEMBL | tr|A0A072V288|A0A072V288_MEDTR | 8.00E-98 | Plastid transcriptionally active protein {ECO:0000313|EMBL:KEH35463.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00326 | 2275 | 5162 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.755 |
| SRR1783600 | control | 19.085 |
| SRR1783602 | moderate drought stress | 12.456 |
| SRR1811619 | moderate drought stress | 12.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.806 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.383 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.699 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.688 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.307 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.018 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 64.872 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 64.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.595 |
| SRR2868004 | Drought Stress (root) | 14.242 |
| SRR2967015 | Control (root) | 14.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.812 |
| SRR9715740 | Leaf | 11.332 |
| SRR9715741 | Leaf | 20.050 |
| SRR9715739 | Root | 4.821 |
| SRR9715742 | Root | 9.161 |
| SRR9715743 | Root | 7.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.474 |
| SRR8749028 | MeJA induced 9h | 17.883 |
| SRR8749029 | MeJA induced 9h | 35.238 |
| SRR8749030 | Uninduced | 4.634 |
| SRR8749031 | Uninduced | 1.449 |
| SRR8749032 | Uninduced | 4.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.282 |
| SRR8400027 | Control - Root | 14.564 |