Gene detail information of Glyur000324s00015443.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29230.1 | 3.00E-140 | NAC domain containing protein 75 |
| NR | XP_006584802.1 | 0 | PREDICTED: uncharacterized protein LOC100799291 isoform X1 [Glycine max] |
| Swissprot | tr|Q6NQK2|NAC8_ARATH | 8.00E-67 | NAC domain-containing protein 8 |
| trEMBL | tr|I1KPV2|I1KPV2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G03590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00324 | 129601 | 134197 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000324s00015443.1 | PF02365.10 | NAM | 47 | 190 | 2.40E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.636 |
| SRR1783600 | control | 4.674 |
| SRR1783602 | moderate drought stress | 4.746 |
| SRR1811619 | moderate drought stress | 4.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.544 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.666 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.170 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.146 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.829 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.532 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.776 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.268 |
| SRR2868004 | Drought Stress (root) | 5.885 |
| SRR2967015 | Control (root) | 6.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.051 |
| SRR9715740 | Leaf | 1.571 |
| SRR9715741 | Leaf | 1.968 |
| SRR9715739 | Root | 0.502 |
| SRR9715742 | Root | 3.446 |
| SRR9715743 | Root | 2.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.457 |
| SRR8749028 | MeJA induced 9h | 4.081 |
| SRR8749029 | MeJA induced 9h | 11.529 |
| SRR8749030 | Uninduced | 3.326 |
| SRR8749031 | Uninduced | 5.832 |
| SRR8749032 | Uninduced | 3.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.413 |
| SRR8400027 | Control - Root | 9.982 |