Gene detail information of Glyur000324s00015439 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29310.1 | 1.00E-133 | Protein of unknown function (DUF1005) |
| NR | XP_003525292.1 | 0 | PREDICTED: uncharacterized protein LOC100785838 [Glycine max] |
| trEMBL | tr|I1K604|I1K604_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G36000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00324 | 108616 | 111435 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000324s00015439.1 | PF06219.7 | DUF1005 | 1 | 355 | 4.80E-125 |
| Glyur000324s00015439.1 | PF06219.7 | DUF1005 | 365 | 428 | 4.00E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.170 |
| SRR1783600 | control | 1.134 |
| SRR1783602 | moderate drought stress | 2.400 |
| SRR1811619 | moderate drought stress | 2.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.391 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.347 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.073 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.072 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.636 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.513 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.395 |
| SRR2868004 | Drought Stress (root) | 1.583 |
| SRR2967015 | Control (root) | 1.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.257 |
| SRR9715740 | Leaf | 0.791 |
| SRR9715741 | Leaf | 0.096 |
| SRR9715739 | Root | 0.195 |
| SRR9715742 | Root | 0.301 |
| SRR9715743 | Root | 0.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.298 |
| SRR8749028 | MeJA induced 9h | 5.748 |
| SRR8749029 | MeJA induced 9h | 9.612 |
| SRR8749030 | Uninduced | 10.075 |
| SRR8749031 | Uninduced | 5.892 |
| SRR8749032 | Uninduced | 9.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.655 |
| SRR8400027 | Control - Root | 1.826 |