Gene detail information of Glyur000324s00015435 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56550.1 | 1.00E-18 | oxidative stress 3 |
| NR | NP_001235790.1 | 2.72E-65 | uncharacterized protein LOC100526906 [Glycine max] |
| trEMBL | tr|C6T2P9|C6T2P9_SOYBN | 1.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G35940.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00324 | 75767 | 77201 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.140 |
| SRR1783600 | control | 0.166 |
| SRR1783602 | moderate drought stress | 5.719 |
| SRR1811619 | moderate drought stress | 5.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.540 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.460 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.935 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.006 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.559 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.531 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.811 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.960 |
| SRR2868004 | Drought Stress (root) | 35.731 |
| SRR2967015 | Control (root) | 49.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 87.263 |
| SRR9715740 | Leaf | 27.570 |
| SRR9715741 | Leaf | 110.366 |
| SRR9715739 | Root | 0.038 |
| SRR9715742 | Root | 0.846 |
| SRR9715743 | Root | 0.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.497 |
| SRR8749028 | MeJA induced 9h | 27.878 |
| SRR8749029 | MeJA induced 9h | 8.661 |
| SRR8749030 | Uninduced | 6.309 |
| SRR8749031 | Uninduced | 54.705 |
| SRR8749032 | Uninduced | 49.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.836 |
| SRR8400027 | Control - Root | 4.882 |