Gene detail information of Glyur000324s00015433 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16490.1 | 1.00E-50 | IQ-domain 26 |
| NR | XP_003630704.1 | 0 | hypothetical protein MTR_8g102400 [Medicago truncatula] |
| trEMBL | tr|G7L7E7|G7L7E7_MEDTR | 0 | IQ calmodulin-binding motif protein {ECO:0000313|EMBL:AET05180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00324 | 56976 | 59611 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000324s00015433.2 | PF13178.1 | DUF4005 | 306 | 379 | 5.60E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.476 |
| SRR1783600 | control | 15.839 |
| SRR1783602 | moderate drought stress | 9.979 |
| SRR1811619 | moderate drought stress | 10.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.012 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.605 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.064 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.063 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.021 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.077 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.108 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.110 |
| SRR2868004 | Drought Stress (root) | 3.719 |
| SRR2967015 | Control (root) | 5.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.888 |
| SRR9715740 | Leaf | 0.111 |
| SRR9715741 | Leaf | 0.887 |
| SRR9715739 | Root | 5.441 |
| SRR9715742 | Root | 3.740 |
| SRR9715743 | Root | 4.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.581 |
| SRR8749028 | MeJA induced 9h | 0.020 |
| SRR8749029 | MeJA induced 9h | 0.048 |
| SRR8749030 | Uninduced | 0.037 |
| SRR8749031 | Uninduced | 0.022 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.344 |
| SRR8400027 | Control - Root | 19.451 |