Gene detail

Gene detail information of Glyur000324s00015431.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G29130.1	0	hexokinase 1
NR	XP_003530493.1	0	PREDICTED: hexokinase-1-like [Glycine max]
COG	YP_001679802.1	5.00E-60	hexokinase [Heliobacterium modesticaldum Ice1]
Swissprot	tr\|Q9SEK3\|HXK1_SPIOL	0	Hexokinase-1
trEMBL	tr\|I1KPW6\|I1KPW6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G03730.1}

Sequence

Transcript Sequence

>Glyur000324s00015431.1
ATCAAATAAATCTATTTTTCATTTTTGTTTGTTCATTCATTCATTAACTAAAATTTCCATTCCCATAGAATCAGATCTAGATTATTATTTTTTTGTTCTTTTTGTACGTTTTTCTTGTTTAAGATGTCTGTCATCTCACCTCTCTTTCCTAACCCCCAACGGCATTGTCATTTCCTCACCATGCACATGAATAACAAGGATCATTGAGTTTTTCCCCATTACAATTCGGGTCGACCCAATCCAGGTTCCCCCTCATTGAAGGATAAGTTTGCGACTTTGTGGGATTNGGATTTGTTTGGGGGAGAGTGATGGGGAAGGTCGCGGTGGGAGCTGCGGTTGTTTGCACCGCCGCCGTTTGTGCCGCGGCGGCGCTGGTGGTGCGCCACCGTATGATAAGCTCGAGGAAGTGGGCAAGAGCGGTGGCTATACTGAAGGAGTTTGAGGAAAAGTGTGGGACCCCAATTGGGAAGCTGAGACAGGTGGCTGATGCCATGGATGTTGAGATGCATGCTGGTCTCGCATCTGAAGGTGGCAGCAAGCTCAGTATGTTAATCAGCTATGTCGATAATCTCCCTACTGGGGATGAGGAAGGACTCTATTATGCACTAGATCTTGGCGGCACAAACTTCCGTGTCCTTCGTGTACATTTAGGTGGGAAAGAGAAAGGTGTTATTGGCCAAGAGTTTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCAGATGGATTGTTTGATTTTATAGCAGCTGCTCTTGCAAAGTTTGTTGGTTCAGAACCTGAAGGCTTTCATCCTCCCCCTGGCAGACAAAGGGAANTGGGTTTTACATTCTCATTCCCAGTGAAGCAAACATCAATTGCATCTGGGACTCTAATAAAGTGGACTAAGGGTTTCAATATTGAAGATACNGTAATTCTTGTTGGTGAAGATGTGGTGGGAGAACTAACCAAGTCCATGGAAAAAATTGGCCTGGACATGCGTGTTGCTGCTCTAGTTAATGATACCATTGGAACNTTAGCTGGAGGCAGATTCTACAATCAGGATGTTATTGCTGCTGTGATTCTTGGTACTGGGACAAATGCAGCATATGTAGAACGTGCAAATGCAATTCCAAAATGGCATGGCCTTATACCAAAATCAGGAGAGATGGTTATAAACATGGAATGGGGTAATTTCCGATCCTCACATCTTCCTCTAACAGAATATGATCAAGCTCTAGATGCTGAAAGCTTAAACCCTGGAGAACAGATTTTTGAGAAAGTGATTTCTGGCATGTATTTGGGGGAAATTGTAAGGAGAACTTTATTGAAGATGGCTGAAGAGGCTGACTTTTTTGGAGATACTGTCCCCCCCAAGTTGAAAGTTCCTTTCATACTCAGGACACCTGACATGTCTGCCATGCACCATGACACAACTCCAGATCTGAAAGTGGTTGGAAACAAATTGAGGGATATATTGGAGATCTCCAATACATCACTAAAAATGAGGAAGATTGTTGTGGAGCTTTGTGACATTGTTGCTACNCGTGGGGCTCGCCTTGCTGCTGCCGGTATTTTGGGCATCCTGAAGAAAATAGGAAGAGACACAGTGAAGGCTGGGGAGAAGCAAAAGTCAGTGATAGCATTGGATGGAGGGTTGTTTGAACACTATACTAAATTCAGAGTTTGTTTGGAGAGTACACTGAAGGAACTGCTGGGTGATGAGGCAGCTGAGACCATTGTCATTGAGCATGCTAATGATGGCTCTGGCATTGGAGCAGCCCTCCTGGCAGCTTCTCACTCCCAGTATTTGGGAGTGGAGGANTCCTGAAGTTATTGCCAACAAGGTAAAAAAAGACATGTAATACCAGTTTCATTTTTTTTTTGGCATACNTGATAGATCAACACATTGAACCAGCAATGCCTTTGTTATTGCTCCTATAGACTTTCAAACCAAGGGCAGGCAATGTCCACTGTGGGGGTATGTAGGAGGGTTCTGTGTTCTTACTGCAGCCTTGAAGCTCCTGTGCTGGTGACTGGGGCGTCCATTATTTTGGTTGCAGTCTTTGTCTCTCCTATGTTAAGGAATAATATCAAAGTCATAAACTTAAATGTGAGTGTAGCCTGTTTTGCGGAATGTAGCTTGTTTTCAATGATAATAAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00324	39255	44228	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00844	HK	EC:2.7.1.1	Carbon metabolism	map01200
			Glycolysis / Gluconeogenesis	map00010
			Fructose and mannose metabolism	map00051
			Galactose metabolism	map00052
			Starch and sucrose metabolism	map00500
			Amino sugar and nucleotide sugar metabolism	map00520
			Streptomycin biosynthesis	map00521
			Neomycin, kanamycin and gentamicin biosynthesis	map00524
			HIF-1 signaling pathway	map04066
			Insulin signaling pathway	map04910
			Carbohydrate digestion and absorption	map04973
			Central carbon metabolism in cancer	map05230
			Type II diabetes mellitus	map04930

Gene Ontology

biological_process
GO:0005975 carbohydrate metabolic process

molecular_function

GO:0005524 ATP binding

GO:0016773 phosphotransferase activity, alcohol group as acceptor

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000324s00015431.1	PF00349.16	Hexokinase_1	41	239	5.30E-51
Glyur000324s00015431.1	PF03727.11	Hexokinase_2	252	491	7.10E-68

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	17.203
SRR1783600	control	17.180
SRR1783602	moderate drought stress	14.104
SRR1811619	moderate drought stress	13.912

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	24.221
DRR006520	Root Summer glycyrrhizin high producing strain	23.914
DRR006521	Root Winter glycyrrhizin high producing strain	12.594
DRR006522	Root Winter glycyrrhizin high producing strain	12.949
DRR006523	Root Summer glycyrrhizin low producing strain	16.983
DRR006524	Root Summer glycyrrhizin low producing strain	17.074
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.188
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.987

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	58.048
SRR2868004	Drought Stress (root)	36.645
SRR2967015	Control (root)	35.998

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.335
SRR9715740	Leaf	13.271
SRR9715741	Leaf	14.065
SRR9715739	Root	12.095
SRR9715742	Root	14.293
SRR9715743	Root	15.937

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	19.141
SRR8749028	MeJA induced 9h	17.834
SRR8749029	MeJA induced 9h	11.972
SRR8749030	Uninduced	11.472
SRR8749031	Uninduced	4.512
SRR8749032	Uninduced	8.469

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	33.522
SRR8400027	Control - Root	33.127