Gene detail information of Glyur000324s00015425 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15450.1 | 3.00E-105 | Senescence/dehydration-associated protein-related |
| NR | XP_003630712.1 | 0 | hypothetical protein MTR_8g102510 [Medicago truncatula] |
| trEMBL | tr|G7L7F5|G7L7F5_MEDTR | 0 | Senescence/dehydration-associated-like protein {ECO:0000313|EMBL:AET05188.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00324 | 16759 | 18797 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000324s00015425.1 | PF06911.7 | Senescence | 177 | 360 | 2.00E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.152 |
| SRR1783600 | control | 17.144 |
| SRR1783602 | moderate drought stress | 4.751 |
| SRR1811619 | moderate drought stress | 4.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.944 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.654 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.241 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.243 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.400 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.388 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.447 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.099 |
| SRR2868004 | Drought Stress (root) | 6.580 |
| SRR2967015 | Control (root) | 7.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.684 |
| SRR9715740 | Leaf | 1.711 |
| SRR9715741 | Leaf | 2.546 |
| SRR9715739 | Root | 8.339 |
| SRR9715742 | Root | 7.020 |
| SRR9715743 | Root | 8.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.321 |
| SRR8749028 | MeJA induced 9h | 1.491 |
| SRR8749029 | MeJA induced 9h | 3.409 |
| SRR8749030 | Uninduced | 0.427 |
| SRR8749031 | Uninduced | 0.114 |
| SRR8749032 | Uninduced | 0.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.298 |
| SRR8400027 | Control - Root | 28.319 |