Gene detail information of Glyur000324s00015424 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G50430.1 | 3.00E-85 | |
| NR | XP_004509182.1 | 0 | PREDICTED: uncharacterized protein LOC101515375 isoform X2 [Cicer arietinum] |
| trEMBL | tr|A0A072U3S3|A0A072U3S3_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH20485.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00324 | 3040 | 7409 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000324s00015424.1 | PF14695.1 | LINES_C | 622 | 652 | 4.40E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.142 |
| SRR1783600 | control | 1.143 |
| SRR1783602 | moderate drought stress | 1.969 |
| SRR1811619 | moderate drought stress | 1.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.556 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.523 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.770 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.752 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.905 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.909 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.649 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.642 |
| SRR2868004 | Drought Stress (root) | 5.014 |
| SRR2967015 | Control (root) | 6.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.180 |
| SRR9715740 | Leaf | 2.644 |
| SRR9715741 | Leaf | 2.249 |
| SRR9715739 | Root | 0.583 |
| SRR9715742 | Root | 1.794 |
| SRR9715743 | Root | 1.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.180 |
| SRR8749028 | MeJA induced 9h | 1.606 |
| SRR8749029 | MeJA induced 9h | 1.216 |
| SRR8749030 | Uninduced | 1.415 |
| SRR8749031 | Uninduced | 1.417 |
| SRR8749032 | Uninduced | 0.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.887 |
| SRR8400027 | Control - Root | 6.821 |