Gene detail information of Glyur000322s00020909 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78550.1 | 1.00E-09 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| NR | XP_003526710.1 | 1.50E-48 | PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Glycine max] |
| Swissprot | tr|Q9M547|FLS_EUSER | 6.00E-09 | Flavonol synthase/flavanone 3-hydroxylase |
| trEMBL | tr|I1KAR8|I1KAR8_SOYBN | 3.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G13370.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00322 | 154430 | 159709 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000322s00020909.1 | PF14226.1 | DIOX_N | 86 | 123 | 9.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.291 |
| SRR1783600 | control | 1.423 |
| SRR1783602 | moderate drought stress | 1.861 |
| SRR1811619 | moderate drought stress | 1.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.130 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.452 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.564 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.626 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.849 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.861 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.964 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 57.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.783 |
| SRR2868004 | Drought Stress (root) | 1.757 |
| SRR2967015 | Control (root) | 0.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.853 |
| SRR9715740 | Leaf | 36.524 |
| SRR9715741 | Leaf | 30.794 |
| SRR9715739 | Root | 0.050 |
| SRR9715742 | Root | 1.485 |
| SRR9715743 | Root | 0.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.139 |
| SRR8749028 | MeJA induced 9h | 0.532 |
| SRR8749029 | MeJA induced 9h | 0.031 |
| SRR8749030 | Uninduced | 0.899 |
| SRR8749031 | Uninduced | 2.924 |
| SRR8749032 | Uninduced | 0.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.211 |
| SRR8400027 | Control - Root | 2.347 |