Gene detail information of Glyur000322s00020904 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08570.1 | 6.00E-53 | Heavy metal transport/detoxification superfamily protein |
| NR | KHN24785.1 | 1.87E-80 | hypothetical protein glysoja_037127 [Glycine soja] |
| Swissprot | tr|Q9SZN7|HIP26_ARATH | 2.00E-40 | Heavy metal-associated isoprenylated plant protein 26 (Precursor) |
| trEMBL | tr|I1JVJ2|I1JVJ2_SOYBN | 7.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G12040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00322 | 113722 | 114791 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000322s00020904.1 | PF00403.21 | HMA | 31 | 85 | 9.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.187 |
| SRR1783600 | control | 0.242 |
| SRR1783602 | moderate drought stress | 0.479 |
| SRR1811619 | moderate drought stress | 0.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.169 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.102 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.886 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.668 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.291 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.317 |
| SRR2868004 | Drought Stress (root) | 3.650 |
| SRR2967015 | Control (root) | 2.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.002 |
| SRR9715740 | Leaf | 1.869 |
| SRR9715741 | Leaf | 2.250 |
| SRR9715739 | Root | 1.013 |
| SRR9715742 | Root | 2.199 |
| SRR9715743 | Root | 1.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 1.927 |
| SRR8749029 | MeJA induced 9h | 0.209 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.747 |
| SRR8400027 | Control - Root | 7.348 |