Gene detail information of Glyur000322s00020898 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22060.1 | 0 | |
| NR | XP_004515646.1 | 0 | PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503-like [Cicer arietinum] |
| trEMBL | tr|K7KJD1|K7KJD1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G12100.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00322 | 84923 | 95249 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000322s00020898.1 | PF10358.4 | NT-C2 | 11 | 141 | 6.80E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.313 |
| SRR1783600 | control | 8.440 |
| SRR1783602 | moderate drought stress | 7.475 |
| SRR1811619 | moderate drought stress | 7.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.340 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.228 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.128 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.057 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.534 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.598 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.570 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.520 |
| SRR2868004 | Drought Stress (root) | 13.628 |
| SRR2967015 | Control (root) | 14.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.626 |
| SRR9715740 | Leaf | 3.455 |
| SRR9715741 | Leaf | 3.577 |
| SRR9715739 | Root | 1.218 |
| SRR9715742 | Root | 3.764 |
| SRR9715743 | Root | 4.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.539 |
| SRR8749028 | MeJA induced 9h | 8.416 |
| SRR8749029 | MeJA induced 9h | 4.197 |
| SRR8749030 | Uninduced | 5.706 |
| SRR8749031 | Uninduced | 2.688 |
| SRR8749032 | Uninduced | 3.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.836 |
| SRR8400027 | Control - Root | 22.905 |