Gene detail

Gene detail information of Glyur000322s00020896

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G36310.2	5.00E-106	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NR	NP_001242166.1	0	uncharacterized protein LOC100807751 [Glycine max]
COG	YP_008054292.1	1.00E-25	methyltransferase type 11 [Salinarchaeum sp. Harcht-Bsk1]
trEMBL	tr\|I1KA26\|I1KA26_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G11230.1}

Sequence

Transcript Sequence

>Glyur000322s00020896.1
ATGCAGGTGATCTCTGGCAGGTTAATGGTTCATACTTATAGTGCCCTNAAACTGAAAGCAACCAGACTCCTCTATCAACCGAGGGAAGCTCTCAATTTGCCTATTGCCATCGGTGGTTGTGTCTTTCATTCAGGATTTGGTTCAATGAAACAAATGAACTCTAAAGTGGTTTCTAGTTTGTGTACTCTTACCCCCAATGGGGAACCCTGTATCACAGACTCCTCATCCATCAGTGATATCCCCACCACTTCATCTATGAATGTGCAATCTACCCCTGAAATTGAAAAAAAGTTTGTTCATCATGTATACGATGCTATTGCTCCGCATTTCAGCTCCACTCGGTTCGCCAAGTGGCCGAAGGTTGCCGCGTTTCTGTCATCTTTGCCTCCGGGATCTCTTGTCCTGGATGCGGGATGCGGGAATGGGAAATACTTGGGTTTGAATCCTGATTGCTTTTTTATAGGATGTGATATAAGTCCTTCCTTGATTAAGATCTGCTCAGATAGAGGGCATGAAGTTCTGGTTGCAGATGCTGTGAATCTTCCTTACAGAACTGGTTTTGGTGATGCAGCAATATCTATAGCTGTGTTACATCATTTAAGCACTGNAAATAGAAGGAGAAAAGCGATAGAAGAGTTGGTCCGAGTTGTTAAAAAGGGTGGTCTTGTTCTGATTACAGTTTGGGCTGTAGAACAAGAGGATAGATCTCTGGTTACCAAATGGACTCCCCTTCCAGAAAAATATGTTGACGAGTGGCCAGAGCCAGGAAATCCTTGTGCTCGGGCCCCTTCATCCTTATCATTAGAAAGTATTCCAGAAAGTGAGGAGAGTAGCTCAGGTGAGCACATGAAAGTTTGCAATGAGTCAAACATTTCAAGAGATTTGAAGGAAGAAAATAATATGACCAATCAACAGGAATATTTTGTTCCTTGGCATTTACCTTATCATCGTGCCGAAGTCAGTGGTGCTTCTGCTCATGCTCTTGCTACTGGTCTGGCGACTAAAGATGACAAAAAGGGTACCGTAGTGTATAATAGATATTATCATGTCTTTAGTCAAGGCGAGCTTGAAAGCTTGGCAAACGGAATAAGCAATGCTAGAGTTGTTGATCAGTTTTTTGATAAATCAAACTGGTGTATTATTCTAGAGAAGACGTTNTGACCAAGAAATAAACCTTGCTAATATGTCAAGGCACAAATTTTGGTTGCTTCCCCCTTGTGCAACTTATCATCCTCGAGTGAGTATTGTAGGCCAGAGACAATTGCAGTGTTTATCTTGCATCATAGCTTCCCCTAGCTTCTAACNACCTGCTATCAATAAAAAAAATGGACAGCTGCAGAACTTGGACAGTGTTGATTTTCTAAGCATTTTATCATCCAAATCAAGCGACATTCTTCAAGCAACCCCAATTTATTGTTTTTATTGTTCTTTCTTTTTTATTTGCAAAACCCAATTTTGGTTGTAACAATAGAGCAGGAAGGACACCATTGTTGTCTGTTATGAGTGTGATGGTGTTGTTTCTGGACATTTGTCTGCCCTAACAATGCTGAACATGTTTTAGCCACCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00322	79054	81408	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0008168 methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000322s00020896.1	PF08241.7	Methyltransf_11	135	225	3.00E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.516
SRR1783600	control	9.540
SRR1783602	moderate drought stress	7.422
SRR1811619	moderate drought stress	7.299

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.348
DRR006520	Root Summer glycyrrhizin high producing strain	13.063
DRR006521	Root Winter glycyrrhizin high producing strain	5.095
DRR006522	Root Winter glycyrrhizin high producing strain	5.034
DRR006523	Root Summer glycyrrhizin low producing strain	15.864
DRR006524	Root Summer glycyrrhizin low producing strain	15.737
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.652
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.809

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.209
SRR2868004	Drought Stress (root)	11.395
SRR2967015	Control (root)	11.780

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.370
SRR9715740	Leaf	8.901
SRR9715741	Leaf	10.561
SRR9715739	Root	5.911
SRR9715742	Root	16.225
SRR9715743	Root	15.086

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.386
SRR8749028	MeJA induced 9h	5.241
SRR8749029	MeJA induced 9h	2.404
SRR8749030	Uninduced	3.423
SRR8749031	Uninduced	0.648
SRR8749032	Uninduced	1.087

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.679
SRR8400027	Control - Root	17.536