Gene detail information of Glyur000321s00019417 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G12510.1 | 5.00E-12 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_003608748.1 | 1.22E-50 | 14 kDa proline-rich protein DC2.15 [Medicago truncatula] |
| Swissprot | tr|P14009|14KD_DAUCA | 2.00E-38 | 14 kDa proline-rich protein DC2.15 (Precursor) |
| trEMBL | tr|G7JJ02|G7JJ02_MEDTR | 5.00E-51 | Uncharacterized protein {ECO:0000313|EMBL:AFK34609.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00321 | 199147 | 199724 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000321s00019417.1 | PF14547.1 | Hydrophob_seed | 48 | 118 | 1.00E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2046.534 |
| SRR1783600 | control | 2019.533 |
| SRR1783602 | moderate drought stress | 1286.140 |
| SRR1811619 | moderate drought stress | 1268.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 609.105 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 602.108 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3019.359 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3031.725 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 924.586 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 968.576 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.804 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.305 |
| SRR2868004 | Drought Stress (root) | 24.132 |
| SRR2967015 | Control (root) | 24.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.216 |
| SRR9715740 | Leaf | 0.194 |
| SRR9715741 | Leaf | 0.401 |
| SRR9715739 | Root | 395.479 |
| SRR9715742 | Root | 175.982 |
| SRR9715743 | Root | 204.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 446.183 |
| SRR8749028 | MeJA induced 9h | 378.504 |
| SRR8749029 | MeJA induced 9h | 506.775 |
| SRR8749030 | Uninduced | 116.924 |
| SRR8749031 | Uninduced | 51.661 |
| SRR8749032 | Uninduced | 294.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 473.940 |
| SRR8400027 | Control - Root | 500.787 |