Gene detail information of Glyur000321s00019416 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003608748.1 | 8.30E-19 | 14 kDa proline-rich protein DC2.15 [Medicago truncatula] |
| Swissprot | tr|Q9SU34|ERLL2_ARATH | 7.00E-13 | pEARLI1-like lipid transfer protein 2 (Precursor) |
| trEMBL | tr|G7JJ02|G7JJ02_MEDTR | 3.00E-19 | Uncharacterized protein {ECO:0000313|EMBL:AFK34609.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00321 | 191734 | 192521 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 960.713 |
| SRR1783600 | control | 973.069 |
| SRR1783602 | moderate drought stress | 505.736 |
| SRR1811619 | moderate drought stress | 510.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 111.931 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 105.220 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.360 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.886 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 173.008 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 179.025 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.406 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1414.931 |
| SRR2868004 | Drought Stress (root) | 676.220 |
| SRR2967015 | Control (root) | 487.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.567 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.034 |
| SRR9715739 | Root | 149.536 |
| SRR9715742 | Root | 296.130 |
| SRR9715743 | Root | 248.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 310.026 |
| SRR8749028 | MeJA induced 9h | 207.463 |
| SRR8749029 | MeJA induced 9h | 310.953 |
| SRR8749030 | Uninduced | 3.351 |
| SRR8749031 | Uninduced | 0.707 |
| SRR8749032 | Uninduced | 2.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 552.138 |
| SRR8400027 | Control - Root | 851.528 |