Gene detail information of Glyur000321s00019415 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62510.1 | 2.00E-16 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | NP_001237995.1 | 5.35E-68 | uncharacterized protein LOC100305616 precursor [Glycine max] |
| Swissprot | tr|P14009|14KD_DAUCA | 4.00E-37 | 14 kDa proline-rich protein DC2.15 (Precursor) |
| trEMBL | tr|C6SVW9|C6SVW9_SOYBN | 2.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G04380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00321 | 183072 | 183476 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000321s00019415.1 | PF14547.1 | Hydrophob_seed | 50 | 134 | 2.70E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.095 |
| SRR1783600 | control | 39.476 |
| SRR1783602 | moderate drought stress | 15.286 |
| SRR1811619 | moderate drought stress | 15.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.770 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 52.711 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.288 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.373 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 101.526 |
| SRR2868004 | Drought Stress (root) | 44.186 |
| SRR2967015 | Control (root) | 56.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.953 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.281 |
| SRR9715739 | Root | 54.017 |
| SRR9715742 | Root | 13.980 |
| SRR9715743 | Root | 20.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.047 |
| SRR8749028 | MeJA induced 9h | 1.480 |
| SRR8749029 | MeJA induced 9h | 2.930 |
| SRR8749030 | Uninduced | 0.629 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.741 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.816 |
| SRR8400027 | Control - Root | 38.843 |