Gene detail information of Glyur000321s00019404.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G22570.1 | 1.00E-64 | adenine phosphoribosyl transferase 3 |
| NR | KHN34953.1 | 6.57E-87 | Adenine phosphoribosyltransferase 1, chloroplastic [Glycine soja] |
| COG | YP_002601798.1 | 2.00E-44 | hypothetical protein HRM2_05200 [Desulfobacterium autotrophicum HRM2] |
| Swissprot | tr|Q9SUW2|APT3_ARATH | 3.00E-81 | Adenine phosphoribosyltransferase 3 |
| trEMBL | tr|I1LGN2|I1LGN2_SOYBN | 1.00E-87 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G03400.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00321 | 109449 | 113408 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00759 | APRT, apt | EC:2.4.2.7 | Purine metabolism | map00230 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000321s00019404.1 | PF00156.22 | Pribosyltran | 7 | 128 | 7.30E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.233 |
| SRR1783600 | control | 0.321 |
| SRR1783602 | moderate drought stress | 0.076 |
| SRR1811619 | moderate drought stress | 0.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.925 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.729 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.141 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.265 |
| SRR2868004 | Drought Stress (root) | 2.833 |
| SRR2967015 | Control (root) | 1.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.527 |
| SRR8749028 | MeJA induced 9h | 3.605 |
| SRR8749029 | MeJA induced 9h | 2.729 |
| SRR8749030 | Uninduced | 2.790 |
| SRR8749031 | Uninduced | 1.738 |
| SRR8749032 | Uninduced | 1.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.608 |
| SRR8400027 | Control - Root | 1.280 |