Gene detail

Gene detail information of Glyur000321s00019394

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G12260.1	6.00E-78	NAC 007
NR	XP_007155625.1	2.81E-168	hypothetical protein PHAVU_003G217600g [Phaseolus vulgaris]
Swissprot	tr\|Q9FWX2\|NAC7_ARATH	2.00E-117	NAC domain-containing protein 7
trEMBL	tr\|V7CEB3\|V7CEB3_PHAVU	1.00E-168	Uncharacterized protein {ECO:0000313\|EMBL:ESW27620.1}

Sequence

Transcript Sequence

>Glyur000321s00019394.1
ATGAACACATTTTCACATGTACCGCCAGGCTTTCGGTTTCATCCGACTGATGAAGAACTTGTTGATTACTACCTTAGGAAGAAGATAGCGTCCAAAAGGATTGATCTAGATGTCATCAAAGACGTCGATCTCTATAAAATTGAACCATGGGATCTTCAAGCTACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGATAAGGCAATATACTCAAAACATTGCCTGGTTGGGATGAGAAAGACTCTTGTGTTTTACAAAGGACGAGCCCCAAATGGACAGAAATCTGATTGGATCATGCATGAATACCGCCTAGAAACTAATGAAAATGGAACTACTCCGGAAGAGGGGTGGGTTGTATGTAGAGTGTTCAAGAAGCGAATGACAACAATGCAGAAGATGGGGGAGTATGATTCACCCTCCTGTTGGTATGATGATCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGGACAACACCTCATCACCCTTATAATGCACCATACCACCACCCTAATTGCAAGCCGGAACTTGAACTGCAATATAACAACATACCCCATGATGCTGCTTTTCTCCAACTTCCACAGCTTGAAAGCCCCAAAGTTACTACTCCATCATCAGCAGCAACAACAGCCAGTGTCCCTTATGGTCATGCAATAAGCAATAACAACATTAATGGAAGCACCAGCTTTCAGTTCTCTTCTTCATCACATACTCAACAAGAACTACAGATACAACAATATTATTTGCATCATCAACAAAGTAGTCTGCAGCACTCCCTTTTTGGTAGCAATGAGCAAGTGACGGATTGGAGAGTACTTGACAAATTTGTTGCTTCTCAGCTCAGTCACGATGACCAAGATGTTTCCAAGGAGAGTACTACTAGTAATTTCTCCAATGCAGCTATCCTCCATGTGGCTGAACAAATAACTCTTCTTGCGAATGGATCCAAAAAGGCTGAAAGTTCCCAGGAACACGCTTCAACTACTTCTACCTCCAGTTGCCACATGGAACTGTGGAAGTGAAACATTTATATATAGTTACTATATATAGAAGATGCATATATATACTAATAATTATAGCAAGTATTGGATTAAAAAATTAAAGAAGGACCTGAGTTGGCTGAGTATTGCTCCCTACCGTACGTGTTGCTGTATGTACATAATAAACTCAAATATTTTATATCCTTAGTTGTTGATATGAATTTCCGGAGTCTGGAGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00321	43452	46049	+

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000321s00019394.1	PF02365.10	NAM	7	53	2.40E-16
Glyur000321s00019394.1	PF02365.10	NAM	54	105	7.40E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.240
SRR1783600	control	0.310
SRR1783602	moderate drought stress	0.174
SRR1811619	moderate drought stress	0.191

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.853
DRR006520	Root Summer glycyrrhizin high producing strain	2.844
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	3.167
DRR006524	Root Summer glycyrrhizin low producing strain	3.198
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.867
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.839

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.246
SRR2868004	Drought Stress (root)	2.777
SRR2967015	Control (root)	2.701

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.407
SRR9715740	Leaf	3.691
SRR9715741	Leaf	0.911
SRR9715739	Root	0.042
SRR9715742	Root	0.788
SRR9715743	Root	0.460

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.063
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.188
SRR8400027	Control - Root	1.551