Gene detail information of Glyur000321s00019389 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62350.1 | 9.00E-42 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| NR | AFK49081.1 | 4.52E-91 | unknown [Lotus japonicus] |
| Swissprot | tr|P17407|21KD_DAUCA | 2.00E-52 | 21 kDa protein (Precursor) |
| trEMBL | tr|I3T989|I3T989_LOTJA | 2.00E-91 | Uncharacterized protein {ECO:0000313|EMBL:AFK49081.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00321 | 11803 | 12459 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000321s00019389.1 | PF04043.10 | PMEI | 36 | 199 | 8.20E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.352 |
| SRR1783600 | control | 0.533 |
| SRR1783602 | moderate drought stress | 0.116 |
| SRR1811619 | moderate drought stress | 0.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.640 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.432 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 675.055 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 646.320 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.717 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.505 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.480 |
| SRR2868004 | Drought Stress (root) | 5.196 |
| SRR2967015 | Control (root) | 2.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.090 |
| SRR9715739 | Root | 3.087 |
| SRR9715742 | Root | 4.528 |
| SRR9715743 | Root | 3.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 210.566 |
| SRR8749028 | MeJA induced 9h | 103.552 |
| SRR8749029 | MeJA induced 9h | 123.244 |
| SRR8749030 | Uninduced | 82.417 |
| SRR8749031 | Uninduced | 23.645 |
| SRR8749032 | Uninduced | 32.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.304 |
| SRR8400027 | Control - Root | 1.328 |