Gene detail information of Glyur000320s00014338.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63420.1 | 3.00E-167 | Arabidopsis thaliana protein of unknown function (DUF821) |
| NR | XP_003517464.1 | 0 | PREDICTED: KDEL motif-containing protein 1-like isoform X1 [Glycine max] |
| trEMBL | tr|I1JA60|I1JA60_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G42740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00320 | 174853 | 179440 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT90 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000320s00014338.1 | PF05686.7 | Glyco_transf_90 | 128 | 524 | 3.60E-191 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.888 |
| SRR1783600 | control | 55.442 |
| SRR1783602 | moderate drought stress | 31.018 |
| SRR1811619 | moderate drought stress | 30.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.746 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.297 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.025 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.673 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.470 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.821 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.198 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.112 |
| SRR2868004 | Drought Stress (root) | 22.915 |
| SRR2967015 | Control (root) | 19.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.154 |
| SRR9715740 | Leaf | 2.314 |
| SRR9715741 | Leaf | 4.141 |
| SRR9715739 | Root | 4.824 |
| SRR9715742 | Root | 20.441 |
| SRR9715743 | Root | 17.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.855 |
| SRR8749028 | MeJA induced 9h | 20.128 |
| SRR8749029 | MeJA induced 9h | 26.631 |
| SRR8749030 | Uninduced | 34.867 |
| SRR8749031 | Uninduced | 29.267 |
| SRR8749032 | Uninduced | 20.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.098 |
| SRR8400027 | Control - Root | 56.699 |