Gene detail

Gene detail information of Glyur000320s00014337.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G63430.1	0	Leucine-rich repeat protein kinase family protein
NR	XP_006573774.1	0	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max]
COG	YP_004579826.1	5.00E-20	hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprot	tr\|C0LGH8\|Y1634_ARATH	0	Probable LRR receptor-like serine/threonine-protein kinase At1g63430 (Precursor)
trEMBL	tr\|I1JA62\|I1JA62_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G42770.1}

Sequence

Transcript Sequence

>Glyur000320s00014337.1
CTAAAAACTCTCTTTGAATCGAAGTTTTCNGATTTTAGTTACTATCCTCTGGGGTTTACTTCATACTTGAGTTCAGTGTAGTGTCAGTGTCACCCTTCACAATTTGTTGTGTCTCCCATCTCAACCAGATAGTTAGCTGGTTGTTCTGGTTGTTTGTTCTTTCCACTAGTTGCCAAATCTTGCATTTCAACTCCACTTTCTCACCTGTTGTTCACTTTGTTTTATCTTTCTTTTTTTTTTGGCTGCAAAACCTGGTAACTAACACCCAATGCAAATTTTTAGAACCTTCGAACTCAATTCATTGTAGCTTATATTCTTTCATGATATAAATTCTTCCCAATTTCCACCTAGTCTGGGATACCCTTGTTTTACGTTTTTCTTCTTCTTCTTGGAAAGTGCTCTTTGGATTTTGTTAGTTAGATAGAAGTGAAGTTAGTTGCTGACAACGAAAAGATGAATTTTTGTACTTCATTTTTGTTTCTCGGTGTGTTTGCCACGCTCTCTCTTGTGGCTTCTGACACTCTACCCTCAAACGAAGTTTGGGCNCTTACAAGCTTCAAAGAAGCTATCTTTGAAGACCCATATCTAGTTTTATCCAATTGGAATGCGCTGGAATCAGATCCTTGTAACTGGTTTGGTGTCTCATGCACTACGGCTCGAGATCATGTCACCAAGCTAAACATCTCAGGTTCATCATTAAAGGGGTTTCTTCCACCAGAGTTGGGGCAAATTACCTATTTGCAAGAACTAATTCTGTACGGCAACAATCTAATCGGAACAATACCTAAAGAATTGTGCGAGTTGAATTCTCTCAAGGTGTTGGATTTGGGAATGAATCGGTTATTGGGACCAATTCCTCCAGAGATTGGAAATCTAACCCAACTTATGAACATAAACCTGCAGTCAAATATGTTGACTGGTAGGTTACCTCCGGAGCTTGGAAATTTGAGATACCTTCTAGAACTTCGGCTGGACAGGAATAAGCTTCAAGGACCTGTTCCTGCTGGTGGCAGTTCGAATTTGGCTTCAAATATGCATGGGATGTATGTATCAAAGGAGAATATAACTGGCTTCTGTCGTTCACCTCAGTTAAAAGTAGCGGACTTTTCATATAATTTTTTAGTTGGTAGCATACCAAAATGCTTGGAGTATCTTCCAAGGTTAAGCTTTCAAGGGAACTGCCTCCAGGGCAACGACTTAAAGCAGCGGCCTTCCATACAGTGTGCTGGTGCTTCACCTGCCAAGAGTCAGCCAGTGGTGAACCCATACCACCAACCAGCTGATTTTTCGCCCGAGNATCACGGATCTTCGAGACCTGTTTGGCTTTTGGCTCTAGAAATAGTAACAGGAACTATGAGCTGTTTTCAACATAATTGGCCTTATTTATGTGCAGACCCCGACATGTTAAAGGATGTGAGAAGGTTTAGCAGACAGGAGCTTGAAGAGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGACAGTGTGGTCTACAAGGGAACCATGAAAGCTGGGCCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTGGAACTNTATTTTCAGAGAGAGGTGGCAGAACTGGCAAGGTTAAATCATGAGAATACCGGAAAACTACTAGGCTATTGCAGAGAGAGCACTCCATTTACGAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGAGCACCTACATTGTTATGAAGAAGGATGCCAATTCTCCTGGACACGGCGTATGAAAATTGCTATAGGCATCGCACGTGGACTCAAGTATTTGCACACAGAAGTTGAGCCTCCATTCACTATCTCAGAGCTGAATTCTAATGCTGTATACCTAACAGAAGAATTCTCTCCCAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTAGCAGCCAAGGTGCTGTATGCATTCTTCCAAACTCCCTTGAGGCGCGCCATCTTGATACCAAAGGAAACATATATGCTTTTGGGGTACTTCTACTAGAGATAATCAGCGGGAGACCTCCATATTGTAAGGACAAAGGGTACTTGGTGGACTGGGCCAAGGACTATCTTGAAATGCCAGACGTAATGTCACATTTGGTGGACCCCGAATTGAAGAATTTTAGACATGATGACCTCAAAGTGATATGCGAGGTAATAACTCTTTGTATCAATCCTGATACACCTTCGCGTCCATCTATGCGAGAATTATGCAGCATGCTGGAGAGCAGAATTGACACATCAGTAAGCGTGGAGCTCAAGTCATCATCTTTGGCCTGGGCTGAACTTGCACTTTTATCATAATAATGTAGTCAAAACTAACAAATCTACACTAAGCATAGATATACACAAGTAATAATTTTCTCACTACTTTCTTTTCTTTTTTTTTTCCCTCTTCAATTTTATTTCTTTTGTAAATGATTGCTCAAAAAGGATGTGTTAGAGGAGCATTAGGGATGCTCCTGAAATTGTTAAGTACTGCAAGGTCTCGTTGTATAGCACTAGCCGACAGGTAGAAGTCCTGAAATTGTTAAATAGAGGAAATATTGTATTGGACAAGTCACAAGTGTTTTCCTTTATGCATTATATTGAGCATTGTTTTATAACGTCCTGGGCACTTTAGTCATTTTTGGTCAGGATAGCCAGGCNTTTAGTCATTTTCTATAGCTTGTTTGGATTTGTATCAAAAGAAAGAAATGTACTAAGAGAGTCATATCAGTGCCGTGCCATATTTGCCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00320	164189	168853	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.15.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000320s00014337.1	PF08263.7	LRRNT_2	27	65	6.90E-09
Glyur000320s00014337.1	PF00560.28	LRR_1	119	141	1.2
Glyur000320s00014337.1	PF07714.12	Pkinase_Tyr	338	607	1.00E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.613
SRR1783600	control	6.538
SRR1783602	moderate drought stress	6.994
SRR1811619	moderate drought stress	7.118

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.325
DRR006520	Root Summer glycyrrhizin high producing strain	8.352
DRR006521	Root Winter glycyrrhizin high producing strain	1.655
DRR006522	Root Winter glycyrrhizin high producing strain	1.639
DRR006523	Root Summer glycyrrhizin low producing strain	14.107
DRR006524	Root Summer glycyrrhizin low producing strain	14.442
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.134
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.236

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.535
SRR2868004	Drought Stress (root)	18.793
SRR2967015	Control (root)	20.543

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.755
SRR9715740	Leaf	5.299
SRR9715741	Leaf	4.127
SRR9715739	Root	3.524
SRR9715742	Root	7.892
SRR9715743	Root	6.993

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.999
SRR8749028	MeJA induced 9h	2.424
SRR8749029	MeJA induced 9h	2.658
SRR8749030	Uninduced	0.553
SRR8749031	Uninduced	0.183
SRR8749032	Uninduced	0.445

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.598
SRR8400027	Control - Root	19.776