Gene detail information of Glyur000320s00014316 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G11450.1 | 3.00E-95 | Protein of unknown function (DUF3527) |
| NR | XP_006573778.1 | 0 | PREDICTED: uncharacterized protein LOC100776815 isoform X1 [Glycine max] |
| trEMBL | tr|I1JA78|I1JA78_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G42930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00320 | 44745 | 47969 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000320s00014316.1 | PF12043.3 | DUF3527 | 238 | 584 | 4.70E-99 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.767 |
| SRR1783600 | control | 3.876 |
| SRR1783602 | moderate drought stress | 4.431 |
| SRR1811619 | moderate drought stress | 4.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.286 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.330 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.929 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.866 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.829 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.800 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.336 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.382 |
| SRR2868004 | Drought Stress (root) | 6.977 |
| SRR2967015 | Control (root) | 6.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.347 |
| SRR9715740 | Leaf | 1.211 |
| SRR9715741 | Leaf | 0.705 |
| SRR9715739 | Root | 0.362 |
| SRR9715742 | Root | 2.617 |
| SRR9715743 | Root | 2.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.574 |
| SRR8749028 | MeJA induced 9h | 1.308 |
| SRR8749029 | MeJA induced 9h | 1.117 |
| SRR8749030 | Uninduced | 0.747 |
| SRR8749031 | Uninduced | 0.901 |
| SRR8749032 | Uninduced | 0.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.825 |
| SRR8400027 | Control - Root | 9.125 |