Gene detail information of Glyur000319s00018977 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44670.1 | 2.00E-23 | Protein of unknown function (DUF581) |
| NR | NP_001235150.1 | 2.46E-62 | uncharacterized protein LOC100499981 [Glycine max] |
| trEMBL | tr|C6SZ02|C6SZ02_SOYBN | 9.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G13450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00319 | 108446 | 110032 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000319s00018977.1 | PF04570.9 | DUF581 | 30 | 81 | 3.20E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 50.446 |
| SRR1783600 | control | 50.236 |
| SRR1783602 | moderate drought stress | 70.784 |
| SRR1811619 | moderate drought stress | 68.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.838 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 61.183 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 52.359 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 50.547 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.756 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.940 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.994 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.787 |
| SRR2868004 | Drought Stress (root) | 43.459 |
| SRR2967015 | Control (root) | 27.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.004 |
| SRR9715740 | Leaf | 23.350 |
| SRR9715741 | Leaf | 20.916 |
| SRR9715739 | Root | 2.232 |
| SRR9715742 | Root | 16.344 |
| SRR9715743 | Root | 11.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.756 |
| SRR8749028 | MeJA induced 9h | 68.792 |
| SRR8749029 | MeJA induced 9h | 40.633 |
| SRR8749030 | Uninduced | 19.101 |
| SRR8749031 | Uninduced | 11.033 |
| SRR8749032 | Uninduced | 38.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 101.425 |
| SRR8400027 | Control - Root | 92.353 |