Gene detail information of Glyur000319s00018971 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55390.2 | 4.00E-15 | ENHANCED DOWNY MILDEW 2 |
| NR | XP_004516997.1 | 1.73E-38 | PREDICTED: uncharacterized protein LOC101512524 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7LCK5|G7LCK5_MEDTR | 4.00E-34 | Enhanced downy mildew protein {ECO:0000313|EMBL:AET01256.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00319 | 76586 | 76985 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000319s00018971.1 | PF12047.3 | DNMT1-RFD | 11 | 91 | 3.30E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.733 |
| SRR1783600 | control | 1.849 |
| SRR1783602 | moderate drought stress | 1.115 |
| SRR1811619 | moderate drought stress | 1.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.980 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.938 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.366 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.943 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.468 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.293 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.670 |
| SRR2868004 | Drought Stress (root) | 2.162 |
| SRR2967015 | Control (root) | 2.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.787 |
| SRR9715740 | Leaf | 0.277 |
| SRR9715741 | Leaf | 0.178 |
| SRR9715739 | Root | 0.303 |
| SRR9715742 | Root | 3.104 |
| SRR9715743 | Root | 1.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.637 |
| SRR8749028 | MeJA induced 9h | 0.027 |
| SRR8749029 | MeJA induced 9h | 0.062 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.291 |
| SRR8400027 | Control - Root | 11.486 |