Gene detail information of Glyur000319s00018958 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G02180.1 | 3.00E-67 | ferredoxin-related |
| NR | XP_006583506.1 | 3.74E-124 | PREDICTED: uncharacterized protein LOC100820431 [Glycine max] |
| trEMBL | tr|K7L132|K7L132_SOYBN | 1.00E-124 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G13070.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00319 | 11425 | 12410 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.330 |
| SRR1783600 | control | 6.239 |
| SRR1783602 | moderate drought stress | 3.504 |
| SRR1811619 | moderate drought stress | 3.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.694 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.206 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.534 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.420 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.825 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.860 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.952 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.475 |
| SRR2868004 | Drought Stress (root) | 5.160 |
| SRR2967015 | Control (root) | 8.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.665 |
| SRR9715740 | Leaf | 0.359 |
| SRR9715741 | Leaf | 0.374 |
| SRR9715739 | Root | 6.190 |
| SRR9715742 | Root | 0.897 |
| SRR9715743 | Root | 1.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.446 |
| SRR8749028 | MeJA induced 9h | 4.335 |
| SRR8749029 | MeJA induced 9h | 7.656 |
| SRR8749030 | Uninduced | 0.542 |
| SRR8749031 | Uninduced | 0.247 |
| SRR8749032 | Uninduced | 1.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.294 |
| SRR8400027 | Control - Root | 17.482 |