Gene detail information of Glyur000317s00022177 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004493872.1 | 1.37E-15 | PREDICTED: glycinin G4-like [Cicer arietinum] |
| Swissprot | tr|P11828|GLYG3_SOYBN | 1.00E-11 | Glycinin B subunit (Precursor) |
| trEMBL | tr|A0A072U489|A0A072U489_MEDTR | 7.00E-16 | Glycinin G4 {ECO:0000313|EMBL:KEH23928.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00317 | 128130 | 128806 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.886 |
| SRR1783600 | control | 2.404 |
| SRR1783602 | moderate drought stress | 4.762 |
| SRR1811619 | moderate drought stress | 4.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.343 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.306 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.503 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.106 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.703 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.762 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.837 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.000 |
| SRR2868004 | Drought Stress (root) | 2.134 |
| SRR2967015 | Control (root) | 2.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.251 |
| SRR8749028 | MeJA induced 9h | 2.138 |
| SRR8749029 | MeJA induced 9h | 1.337 |
| SRR8749030 | Uninduced | 4.572 |
| SRR8749031 | Uninduced | 1.474 |
| SRR8749032 | Uninduced | 3.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.980 |
| SRR8400027 | Control - Root | 1.084 |