Gene detail information of Glyur000316s00018290 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001053017.1 | 1.14E-07 | Os04g0464300 [Oryza sativa Japonica Group] |
| trEMBL | tr|Q0JCK6|Q0JCK6_ORYSJ | 4.00E-08 | Os04g0464300 protein {ECO:0000313|EMBL:BAF14931.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00316 | 183510 | 185997 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.341 |
| SRR1783600 | control | 17.395 |
| SRR1783602 | moderate drought stress | 19.525 |
| SRR1811619 | moderate drought stress | 21.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 57.297 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 55.440 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 44.141 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 41.803 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 42.851 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.412 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.337 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.502 |
| SRR2868004 | Drought Stress (root) | 18.017 |
| SRR2967015 | Control (root) | 33.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.420 |
| SRR9715740 | Leaf | 6.455 |
| SRR9715741 | Leaf | 7.277 |
| SRR9715739 | Root | 3.331 |
| SRR9715742 | Root | 14.134 |
| SRR9715743 | Root | 4.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.098 |
| SRR8749028 | MeJA induced 9h | 1.273 |
| SRR8749029 | MeJA induced 9h | 0.422 |
| SRR8749030 | Uninduced | 0.381 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.846 |
| SRR8400027 | Control - Root | 5.472 |