Gene detail information of Glyur000316s00018281 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80160.1 | 4.00E-58 | Lactoylglutathione lyase / glyoxalase I family protein |
| NR | XP_004508519.1 | 1.25E-101 | PREDICTED: uncharacterized protein YwkD-like [Cicer arietinum] |
| COG | NP_244739.1 | 3.00E-14 | hypothetical protein BH3872 [Bacillus halodurans C-125] |
| trEMBL | tr|I3SBX8|I3SBX8_LOTJA | 5.00E-100 | Uncharacterized protein {ECO:0000313|EMBL:AFK37770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00316 | 128557 | 129343 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000316s00018281.1 | PF12681.2 | Glyoxalase_2 | 20 | 132 | 7.70E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.476 |
| SRR1783600 | control | 0.379 |
| SRR1783602 | moderate drought stress | 0.146 |
| SRR1811619 | moderate drought stress | 0.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.211 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.209 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.176 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.102 |
| SRR2868004 | Drought Stress (root) | 11.121 |
| SRR2967015 | Control (root) | 5.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.775 |
| SRR9715740 | Leaf | 0.121 |
| SRR9715741 | Leaf | 0.199 |
| SRR9715739 | Root | 0.306 |
| SRR9715742 | Root | 0.114 |
| SRR9715743 | Root | 0.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.230 |
| SRR8749028 | MeJA induced 9h | 41.974 |
| SRR8749029 | MeJA induced 9h | 35.826 |
| SRR8749030 | Uninduced | 45.020 |
| SRR8749031 | Uninduced | 409.522 |
| SRR8749032 | Uninduced | 143.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.820 |
| SRR8400027 | Control - Root | 6.695 |