Gene detail information of Glyur000316s00018278 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20100.1 | 6.00E-07 | |
| NR | XP_004508624.1 | 8.74E-37 | PREDICTED: uncharacterized protein At1g15400-like [Cicer arietinum] |
| Swissprot | tr|Q9XI29|Y1540_ARATH | 6.00E-17 | Uncharacterized protein At1g15400 |
| trEMBL | tr|G7JVC7|G7JVC7_MEDTR | 2.00E-34 | Uncharacterized protein {ECO:0000313|EMBL:AES91483.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00316 | 118106 | 119069 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 59.784 |
| SRR1783600 | control | 62.041 |
| SRR1783602 | moderate drought stress | 194.082 |
| SRR1811619 | moderate drought stress | 201.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 57.645 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.638 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 72.985 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 73.531 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 61.045 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 59.753 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.129 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.985 |
| SRR2868004 | Drought Stress (root) | 63.007 |
| SRR2967015 | Control (root) | 72.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.851 |
| SRR9715740 | Leaf | 2.253 |
| SRR9715741 | Leaf | 4.060 |
| SRR9715739 | Root | 33.352 |
| SRR9715742 | Root | 18.044 |
| SRR9715743 | Root | 20.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.355 |
| SRR8749028 | MeJA induced 9h | 33.414 |
| SRR8749029 | MeJA induced 9h | 35.847 |
| SRR8749030 | Uninduced | 27.903 |
| SRR8749031 | Uninduced | 85.562 |
| SRR8749032 | Uninduced | 123.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.285 |
| SRR8400027 | Control - Root | 26.439 |