Gene detail information of Glyur000316s00018268 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25940.1 | 7.00E-13 | early nodulin-related |
| NR | NP_001240002.1 | 8.45E-28 | uncharacterized protein LOC100820292 [Glycine max] |
| Swissprot | tr|Q02921|NO93_SOYBN | 1.00E-26 | Early nodulin-93 |
| trEMBL | tr|K7ML67|K7ML67_SOYBN | 2.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G12601.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00316 | 69729 | 73307 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000316s00018268.2 | PF03386.9 | ENOD93 | 6 | 52 | 3.80E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.768 |
| SRR1783600 | control | 1.758 |
| SRR1783602 | moderate drought stress | 0.639 |
| SRR1811619 | moderate drought stress | 0.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.701 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.651 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 166.082 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 161.569 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.190 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.658 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.562 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.916 |
| SRR2868004 | Drought Stress (root) | 0.477 |
| SRR2967015 | Control (root) | 0.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.191 |
| SRR9715740 | Leaf | 0.153 |
| SRR9715741 | Leaf | 0.156 |
| SRR9715739 | Root | 4.522 |
| SRR9715742 | Root | 1.275 |
| SRR9715743 | Root | 1.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 236.218 |
| SRR8749028 | MeJA induced 9h | 278.527 |
| SRR8749029 | MeJA induced 9h | 441.150 |
| SRR8749030 | Uninduced | 938.016 |
| SRR8749031 | Uninduced | 834.741 |
| SRR8749032 | Uninduced | 1239.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.265 |
| SRR8400027 | Control - Root | 9.100 |