Gene detail information of Glyur000315s00012782 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56550.1 | 3.00E-14 | oxidative stress 3 |
| NR | XP_004503086.1 | 7.58E-67 | PREDICTED: uncharacterized protein DDB_G0271670-like [Cicer arietinum] |
| trEMBL | tr|C6SY88|C6SY88_SOYBN | 1.00E-59 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G05160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00315 | 154857 | 156181 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.721 |
| SRR1783600 | control | 2.620 |
| SRR1783602 | moderate drought stress | 7.811 |
| SRR1811619 | moderate drought stress | 7.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.788 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.865 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.075 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.442 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.615 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.689 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 65.747 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 65.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.793 |
| SRR2868004 | Drought Stress (root) | 160.499 |
| SRR2967015 | Control (root) | 275.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 242.668 |
| SRR9715740 | Leaf | 69.210 |
| SRR9715741 | Leaf | 358.028 |
| SRR9715739 | Root | 7.928 |
| SRR9715742 | Root | 18.396 |
| SRR9715743 | Root | 16.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 335.571 |
| SRR8749028 | MeJA induced 9h | 346.770 |
| SRR8749029 | MeJA induced 9h | 263.487 |
| SRR8749030 | Uninduced | 133.425 |
| SRR8749031 | Uninduced | 366.025 |
| SRR8749032 | Uninduced | 242.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.693 |
| SRR8400027 | Control - Root | 11.001 |