Gene detail information of Glyur000315s00012764 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62130.1 | 4.00E-38 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| NR | XP_004495860.1 | 5.07E-65 | PREDICTED: isopenicillin N epimerase-like [Cicer arietinum] |
| Swissprot | tr|Q9M1R1|LCYD1_ARATH | 2.00E-44 | L-cysteine desulfhydrase |
| trEMBL | tr|K7K5U4|K7K5U4_SOYBN | 9.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G01070.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00315 | 85950 | 86297 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.295 |
| SRR1783600 | control | 4.013 |
| SRR1783602 | moderate drought stress | 9.031 |
| SRR1811619 | moderate drought stress | 8.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.977 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.909 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.700 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.276 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.513 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.715 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.624 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.527 |
| SRR2868004 | Drought Stress (root) | 21.078 |
| SRR2967015 | Control (root) | 16.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.279 |
| SRR9715740 | Leaf | 17.183 |
| SRR9715741 | Leaf | 4.013 |
| SRR9715739 | Root | 13.720 |
| SRR9715742 | Root | 5.755 |
| SRR9715743 | Root | 8.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.624 |
| SRR8749028 | MeJA induced 9h | 4.766 |
| SRR8749029 | MeJA induced 9h | 4.728 |
| SRR8749030 | Uninduced | 3.987 |
| SRR8749031 | Uninduced | 1.552 |
| SRR8749032 | Uninduced | 0.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.215 |
| SRR8400027 | Control - Root | 8.599 |