Gene detail information of Glyur000315s00012761 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G01790.1 | 3.00E-30 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein |
| NR | XP_004503447.1 | 4.21E-82 | PREDICTED: uncharacterized protein LOC101499082 [Cicer arietinum] |
| trEMBL | tr|V7C072|V7C072_PHAVU | 2.00E-76 | Uncharacterized protein {ECO:0000313|EMBL:ESW22286.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00315 | 68548 | 72823 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000315s00012761.1 | PF01248.21 | Ribosomal_L7Ae | 103 | 166 | 1.00E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.124 |
| SRR1783600 | control | 4.353 |
| SRR1783602 | moderate drought stress | 8.724 |
| SRR1811619 | moderate drought stress | 9.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.588 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.558 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.512 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.739 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.061 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.195 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.665 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.032 |
| SRR2868004 | Drought Stress (root) | 6.632 |
| SRR2967015 | Control (root) | 6.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.518 |
| SRR9715740 | Leaf | 15.223 |
| SRR9715741 | Leaf | 14.047 |
| SRR9715739 | Root | 0.505 |
| SRR9715742 | Root | 2.525 |
| SRR9715743 | Root | 2.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.312 |
| SRR8749028 | MeJA induced 9h | 12.410 |
| SRR8749029 | MeJA induced 9h | 15.387 |
| SRR8749030 | Uninduced | 12.857 |
| SRR8749031 | Uninduced | 12.908 |
| SRR8749032 | Uninduced | 17.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.461 |
| SRR8400027 | Control - Root | 4.396 |