Gene detail information of Glyur000314s00018017 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G03420.1 | 2.00E-110 | Protein of unknown function (DUF789) |
| NR | KHN31952.1 | 0 | hypothetical protein glysoja_025786 [Glycine soja] |
| trEMBL | tr|V7BYZ8|V7BYZ8_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW21866.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00314 | 87895 | 92319 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000314s00018017.1 | PF05623.7 | DUF789 | 12 | 310 | 4.90E-106 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.350 |
| SRR1783600 | control | 8.491 |
| SRR1783602 | moderate drought stress | 11.245 |
| SRR1811619 | moderate drought stress | 11.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.674 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.906 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 66.233 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 64.843 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.789 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.939 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.274 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.486 |
| SRR2868004 | Drought Stress (root) | 16.082 |
| SRR2967015 | Control (root) | 19.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.586 |
| SRR9715740 | Leaf | 24.304 |
| SRR9715741 | Leaf | 21.570 |
| SRR9715739 | Root | 16.271 |
| SRR9715742 | Root | 20.732 |
| SRR9715743 | Root | 18.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 61.369 |
| SRR8749028 | MeJA induced 9h | 108.348 |
| SRR8749029 | MeJA induced 9h | 96.345 |
| SRR8749030 | Uninduced | 23.276 |
| SRR8749031 | Uninduced | 73.776 |
| SRR8749032 | Uninduced | 65.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.126 |
| SRR8400027 | Control - Root | 14.142 |