Gene detail information of Glyur000314s00018001 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007132667.1 | 6.52E-11 | hypothetical protein PHAVU_011G114500g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7AKN7|V7AKN7_PHAVU | 2.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:ESW04661.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00314 | 4550 | 4950 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 107.597 |
| SRR1783600 | control | 113.743 |
| SRR1783602 | moderate drought stress | 66.380 |
| SRR1811619 | moderate drought stress | 71.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 94.688 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 101.940 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 549.396 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 541.175 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 178.815 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 173.326 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.119 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 78.459 |
| SRR2868004 | Drought Stress (root) | 124.973 |
| SRR2967015 | Control (root) | 135.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.753 |
| SRR9715740 | Leaf | 60.514 |
| SRR9715741 | Leaf | 52.729 |
| SRR9715739 | Root | 73.485 |
| SRR9715742 | Root | 85.264 |
| SRR9715743 | Root | 75.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 71.477 |
| SRR8749028 | MeJA induced 9h | 45.003 |
| SRR8749029 | MeJA induced 9h | 89.877 |
| SRR8749030 | Uninduced | 67.641 |
| SRR8749031 | Uninduced | 51.021 |
| SRR8749032 | Uninduced | 87.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.015 |
| SRR8400027 | Control - Root | 56.733 |