Gene detail information of Glyur000313s00016919


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G56740.15.00E-152histone acetyltransferase of the GNAT family 2
NRXP_003519360.10PREDICTED: histone acetyltransferase type B catalytic subunit-like [Glycine max]
Swissprottr|Q9FJT8|HATB_ARATH0Histone acetyltransferase type B catalytic subunit
trEMBLtr|K7KAN2|K7KAN2_SOYBN0Histone acetyltransferase {ECO:0000256|RuleBase:RU361211}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold003139344097449+


Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K11303HAT1, KAT1EC:2.3.1.48Alcoholismmap05034


Gene Ontology

biological_process

GO:0006348  chromatin silencing at telomere

GO:0006355  regulation of transcription, DNA-templated

GO:0016568  chromatin modification

GO:0016573  histone acetylation


cellular_component

GO:0005634  nucleus


molecular_function

GO:0004402  histone acetyltransferase activity

GO:0016747  transferase activity, transferring acyl groups other than amino-acyl groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000313s00016919.1PF10394.4Hat1_N281981.20E-22
Glyur000313s00016919.1PF01853.13MOZ_SAS2242946.20E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.867
SRR1783600control14.897
SRR1783602moderate drought stress15.516
SRR1811619moderate drought stress15.189

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.513
DRR006520Root Summer glycyrrhizin high producing strain21.395
DRR006521Root Winter glycyrrhizin high producing strain22.858
DRR006522Root Winter glycyrrhizin high producing strain22.667
DRR006523Root Summer glycyrrhizin low producing strain19.538
DRR006524Root Summer glycyrrhizin low producing strain20.136
DRR006525Leaf Summer glycyrrhizin high producing strain7.968
DRR006526Leaf Summer glycyrrhizin high producing strain8.259

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)34.761
SRR2868004Drought Stress (root)26.568
SRR2967015Control (root)23.553

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf12.750
SRR9715740Leaf17.390
SRR9715741Leaf13.038
SRR9715739Root9.299
SRR9715742Root16.196
SRR9715743Root15.821

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h65.417
SRR8749028MeJA induced 9h33.520
SRR8749029MeJA induced 9h30.320
SRR8749030Uninduced12.342
SRR8749031Uninduced9.396
SRR8749032Uninduced7.162

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root28.831
SRR8400027Control - Root24.052

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved