Gene detail information of Glyur000310s00013621 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12830.1 | 9.00E-40 | SAUR-like auxin-responsive protein family |
| NR | XP_007133360.1 | 3.06E-58 | hypothetical protein PHAVU_011G172600g [Phaseolus vulgaris] |
| Swissprot | tr|P33082|AXX15_SOYBN | 7.00E-14 | Auxin-induced protein X15 |
| trEMBL | tr|V7AII0|V7AII0_PHAVU | 1.00E-58 | Uncharacterized protein {ECO:0000313|EMBL:ESW05354.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00310 | 145235 | 145579 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000310s00013621.1 | PF02519.9 | Auxin_inducible | 9 | 96 | 2.10E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.299 |
| SRR1783600 | control | 0.265 |
| SRR1783602 | moderate drought stress | 0.303 |
| SRR1811619 | moderate drought stress | 0.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.839 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.037 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.631 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.491 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.142 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.979 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.255 |
| SRR2868004 | Drought Stress (root) | 2.980 |
| SRR2967015 | Control (root) | 5.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.584 |
| SRR9715740 | Leaf | 4.132 |
| SRR9715741 | Leaf | 3.860 |
| SRR9715739 | Root | 25.334 |
| SRR9715742 | Root | 21.064 |
| SRR9715743 | Root | 20.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.836 |
| SRR8749028 | MeJA induced 9h | 0.194 |
| SRR8749029 | MeJA induced 9h | 0.592 |
| SRR8749030 | Uninduced | 0.276 |
| SRR8749031 | Uninduced | 0.120 |
| SRR8749032 | Uninduced | 0.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.034 |
| SRR8400027 | Control - Root | 5.700 |