Gene detail information of Glyur000310s00013608 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G16560.3 | 8.00E-147 | Per1-like family protein |
| NR | XP_003528854.1 | 0 | PREDICTED: post-GPI attachment to proteins factor 3-like [Glycine max] |
| trEMBL | tr|I1KIA1|I1KIA1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G07690.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00310 | 58072 | 61707 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000310s00013608.1 | PF04080.8 | Per1 | 68 | 331 | 1.00E-90 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.589 |
| SRR1783600 | control | 17.890 |
| SRR1783602 | moderate drought stress | 11.299 |
| SRR1811619 | moderate drought stress | 11.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.895 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.704 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.573 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.100 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.081 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.998 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.161 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 57.640 |
| SRR2868004 | Drought Stress (root) | 51.231 |
| SRR2967015 | Control (root) | 49.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.577 |
| SRR9715740 | Leaf | 13.856 |
| SRR9715741 | Leaf | 16.685 |
| SRR9715739 | Root | 15.034 |
| SRR9715742 | Root | 17.903 |
| SRR9715743 | Root | 14.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.476 |
| SRR8749028 | MeJA induced 9h | 24.236 |
| SRR8749029 | MeJA induced 9h | 16.195 |
| SRR8749030 | Uninduced | 11.618 |
| SRR8749031 | Uninduced | 6.959 |
| SRR8749032 | Uninduced | 4.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.184 |
| SRR8400027 | Control - Root | 32.002 |