Gene detail information of Glyur000310s00013602 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12955.1 | 6.00E-11 | SAUR-like auxin-responsive protein family |
| NR | NP_001235520.1 | 6.14E-64 | uncharacterized protein LOC100527910 [Glycine max] |
| trEMBL | tr|C6T5U1|C6T5U1_SOYBN | 2.00E-64 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G08130.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00310 | 21702 | 22082 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000310s00013602.1 | PF02519.9 | Auxin_inducible | 12 | 106 | 5.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.708 |
| SRR1783600 | control | 0.750 |
| SRR1783602 | moderate drought stress | 0.465 |
| SRR1811619 | moderate drought stress | 0.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.113 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.922 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.293 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.451 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.725 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.778 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.244 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.890 |
| SRR2868004 | Drought Stress (root) | 6.781 |
| SRR2967015 | Control (root) | 2.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.949 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.272 |
| SRR9715739 | Root | 0.130 |
| SRR9715742 | Root | 0.961 |
| SRR9715743 | Root | 1.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.695 |
| SRR8400027 | Control - Root | 11.307 |